Rhodopseudomonas palustris TIE-1: Rpal_5248
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Entry
Rpal_5248 CDS
T00722
Name
(GenBank) multi antimicrobial extrusion protein MatE
KO
K26937
MATE family, multidrug efflux pump
Organism
rpt
Rhodopseudomonas palustris TIE-1
Brite
KEGG Orthology (KO) [BR:
rpt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpt02000
]
Rpal_5248
Transporters [BR:
rpt02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
Rpal_5248
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
ACF03735
LinkDB
All DBs
Position
complement(5657813..5659249)
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AA seq
478 aa
AA seq
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MSDIAVAELPPVAPAAPAPPAATPPPPKNPLLDDGILRTLLRLSWPNVVALTAGTCVAVA
ETSYIGRLGTEALAAMALVFPFVILTMTMSGGAMGGGVASAIARALGSGDDDRAAVLAMH
ALLIGLCFGLVFTVGMLTFGERALALLGGRGAVLSQAAGYVHIFFAGAVVPWLMNTFAAI
LRGTGNMKLPSLMILSSAVLQIVLGGALGLGFGPIPRFGMPGVAAGTLTAFSIGASVMAW
VIFSGRAGVKPRLDGFRIERGMFIDILKVGAVSCFSPLQSVLTITIFTHMLAHFGTAVLA
GYGIGGRLEFMLTSIAFAVGIASVPMIGMAIGASRVKRARQIAWTAGLVSFLFVGVVGTG
IAIFPHLWIDLFTDDAAVRLAGEQYLRAAAPMYAFIGLSISMYFSAQGAARVLGPVLAQT
GRLLFVVGGGWLLIKSHGSAGSFYLLAAGSMVLLGVTSALSVLVTRWGPKPPAASIAG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatattgccgttgcggagttgccgccggttgcgccagccgcgccggccccgcct
gccgcgacgcctccacctccgaaaaatccgctgctcgacgatggcatcctgcgcacgctg
ctgcggctgtcctggcccaacgtggtggcgctgacggcgggcacctgcgtggcggtcgcc
gagacctcctatatcggccggctcggcaccgaggcgctggccgcgatggcgctggtgttt
ccgttcgtgatcctgaccatgacgatgtccggcggcgcgatgggtggtggcgttgcctcg
gcgatcgcgcgggcgcttggctcgggcgacgacgaccgcgcagcggtgctggcgatgcac
gcgctgctgatcgggctgtgcttcggcctggtgttcacggtcgggatgctgaccttcggc
gagcgggcgctggcgctgctcggcggccgcggcgcggtgctgagccaggccgccggctat
gtgcacatcttctttgccggcgcggtggtgccgtggctgatgaacaccttcgcggcgatc
ctgcgcggcaccggcaacatgaaactgccgtcgctgatgatcctcagctcggcggtgctg
cagatcgtgctcggcggcgcgctcggcctcggcttcggaccgatcccgcggttcggcatg
cccggcgttgccgccggcacgctgacggcattttcgatcggcgcttcggtgatggcctgg
gtgatcttctccggccgggccggggtgaagccgcggctggacggcttccggatcgagcgc
ggcatgttcatcgacatcttgaaggtcggcgccgtgtcgtgcttctcgccgctgcagtcg
gtgctgaccatcacgatcttcacccacatgctggcgcatttcggcaccgcggtgctggcc
ggctacggcatcggcggccggctggagttcatgctgacctcgatcgcgttcgcggtcggc
atcgcctcggtgccgatgatcggcatggcgatcggggccagccgggtgaagcgggcgcgg
cagatcgcctggacggccgggctggtgtcgttcctgttcgtcggggtggtcggcaccggg
atcgcgatctttccgcacctctggatcgacctgttcaccgacgatgcggcggtacggctc
gccggtgagcaatatctccgcgccgcggcgccgatgtacgccttcatcgggctgtcgatc
tcgatgtatttttccgcgcagggcgccgccagggtgctgggaccggtgttggcgcagacc
gggcggctgctgttcgtggtcggcggcggctggctgctgatcaagagccatggcagcgcc
ggcagcttctatctgctcgccgcaggctcgatggtgctgctcggtgtgacgtcagcgctg
agcgtgctggtgacgcgctggggcccgaagccgccggccgcgtcgatcgccggctag
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