Ralstonia pseudosolanacearum RS 476: CDC45_00330
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Entry
CDC45_00330 CDS
T05645
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu00061
Fatty acid biosynthesis
rpu00071
Fatty acid degradation
rpu01100
Metabolic pathways
rpu01212
Fatty acid metabolism
rpu02024
Quorum sensing
rpu04146
Peroxisome
Module
rpu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CDC45_00330
00071 Fatty acid degradation
CDC45_00330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CDC45_00330
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDC45_00330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpu01004
]
CDC45_00330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpu04147
]
CDC45_00330
Enzymes [BR:
rpu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CDC45_00330
Lipid biosynthesis proteins [BR:
rpu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CDC45_00330
Exosome [BR:
rpu04147
]
Exosomal proteins
Exosomal proteins of breast milk
CDC45_00330
Exosomal proteins of breast cancer cells
CDC45_00330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AST25778
LinkDB
All DBs
Position
complement(70881..72575)
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AA seq
564 aa
AA seq
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MTAHNREPVEYLAGEMPLHRYCAHHAAQTPERIALLWYGRTICWRELDQLSTRLAVQFQR
LGVARGHRVALFLQNCPQAILAHLAAAKLGAIAVPCLPLSRQHELHDQLADCGAKVLVAA
ADLMPIVEAARPGTSVDAVITTRYADLQPAQPACRKALAVPPELIAADIASAPVGRGQAG
SSGQFDLMRLLGEPVDVAERNAVTAIQVDLDEVALMVYTSGITGRPKGAMLTHRNALYKT
AVTVQTSGIQAADVLLAAAPLSHIAGMLMGMNLMLYAGAPTILLYRFDPLAVLQAIDRYR
VTWWYSMTPMNLAVMAHPEAGQYRMASLIGNPCTSFGAPLTEAIADRWRAFAGPQCRIYE
AAYGLSETHTCDAVMPPDAPRWGWHGKIVPQTEVRIVDPHTGAELPPGRSGEITIRSPGV
FRGYWRRDEATRAAMQDGFLRTGDIGQVSPDGYLQWQGRLKELMKVSGYSVFPEDVEALL
SRHPAIRQVAVTPMPDPDKGEVVCAHIVRMSGMALTEAELIAWSRENMAPYKVPRRVRFH
DALPATATGKVLRRLLREEAAVAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccataaccgcgaaccggtcgagtatctcgcgggcgagatgccgctgcaccgc
tattgcgcgcatcacgccgcgcagacccccgagcgtatcgccctgctgtggtacggccgt
acgatctgctggcgcgagctcgatcagctgtcgacgcggctggccgtgcagttccagcgg
ctcggcgtggcgcgtgggcatcgtgtcgccctgttcctgcagaactgtccgcaggccatc
ctggcgcatctggccgccgccaagctgggcgccatcgcggtgccatgcctgccgctgtcg
cgccagcatgaactgcacgaccagttggccgattgcggcgccaaggtcctggttgccgcg
gccgacctgatgcccatcgtcgaagccgcgcggccgggcacctcggtcgacgccgtcatc
accacgcgctatgccgacctgcagccggcgcagcccgcctgccgcaaggcgctggcggtg
ccgcccgagctgatcgccgccgatatcgcgtccgccccggtgggccggggccaagccggc
agcagcggtcagttcgacctcatgcggctgctgggcgagccggtggacgtggccgagcgc
aatgccgtcaccgcgatccaggtcgacctggacgaggtggcgctgatggtctacacgtcc
ggcatcaccgggcgccccaagggggccatgctcacccaccgcaacgcgctgtacaagacc
gccgtgaccgtgcagacgagcggcatccaggccgccgacgtactgctggcggcggcgccg
ctgtcgcacatcgccggcatgctgatgggcatgaacctgatgctgtacgcgggcgcgccg
accatcctgctgtatcgcttcgacccgctggccgtgctgcaggcgatcgaccgctatcgc
gtcacctggtggtacagcatgacgccgatgaatctggcggtgatggcgcatcccgaagcc
gggcagtaccgcatggcctcgctgatcggcaacccgtgtaccagtttcggcgcgccgctg
accgaggcgatcgccgatcgatggcgcgccttcgcggggccgcaatgccgcatctatgaa
gcggcctacggcctatcggaaacgcatacctgcgacgccgtcatgccgcccgatgccccc
cgctggggctggcacggcaagatcgtgccgcagaccgaggttcgcatcgtcgatccgcac
accggcgccgaactgccgccgggccggtcgggcgaaatcacgatccgcagcccgggcgtg
ttccgcggctactggcggcgagacgaggcaacgcgggccgcgatgcaggacggcttcctg
cgcaccggcgacatcggccaggtctcgcccgacggctacctgcaatggcagggccgcctc
aaggaactgatgaaggtgtcgggctacagcgtgttcccggaagatgtggaggcgctgctg
tcgcgccacccggccatccggcaggtggccgtgacaccgatgccggacccggacaagggc
gaggtggtctgcgcccacatcgtgcgcatgagcggcatggcgctcaccgaagccgagctg
atcgcctggtcgcgcgagaacatggcgccgtacaaggtgccgcgccgggtgaggttccac
gacgcgctgccggccacggccaccggcaaggtgctgcggcgactgttgcgggaagaggcg
gcggtggcggcctga
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