Ralstonia pseudosolanacearum RS 476: CDC45_04675
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Entry
CDC45_04675 CDS
T05645
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpu03032
]
CDC45_04675
03036 Chromosome and associated proteins [BR:
rpu03036
]
CDC45_04675
03400 DNA repair and recombination proteins [BR:
rpu03400
]
CDC45_04675
DNA replication proteins [BR:
rpu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CDC45_04675
Chromosome and associated proteins [BR:
rpu03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CDC45_04675
DNA repair and recombination proteins [BR:
rpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CDC45_04675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AST26551
LinkDB
All DBs
Position
962328..962750
Genome browser
AA seq
140 aa
AA seq
DB search
MPMTKSELVEKLAARFPQLLLRDADIAVKTILDAMSDALADGHRIEIRGFGSFGLNRRPP
RVGRNPKSGEKVLVPEKRVPHFKAGKELRERVDRSLERQGDSSSEGEPVSLTAVKAARQA
GGHHAAGFPAEATPTLVMSR
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaccaagtccgaactcgtggaaaaattggccgcccgctttccgcagctgctg
ctgcgggatgcggacatcgcggtcaagacgatcctggatgcgatgtccgacgccttggcg
gacggccatcgcatcgagattcgcgggttcggcagctttggcctgaatcggcgtccaccg
cgcgtcgggcgcaaccccaagtccggcgagaaggtgctggtgcccgaaaaacgggtgccg
cacttcaaggcgggcaaggagctgcgcgaacgggtcgaccgcagcctcgagcggcagggc
gattcctcttcggagggcgagcccgtgtcgctgacggctgtgaaggcggcgcggcaggcc
ggcggtcaccatgccgccggtttcccggcggaagcgacgccgacgctggtcatgtcgcgc
tga
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integrated database retrieval system
