Ralstonia pseudosolanacearum RS 476: CDC45_04835
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Entry
CDC45_04835 CDS
T05645
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CDC45_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpu03019
]
CDC45_04835
03009 Ribosome biogenesis [BR:
rpu03009
]
CDC45_04835
Messenger RNA biogenesis [BR:
rpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CDC45_04835
Ribosome biogenesis [BR:
rpu03009
]
Eukaryotic type
Pre-60S particles
RNases
CDC45_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CTD1
Motif
Other DBs
NCBI-ProteinID:
AST26582
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All DBs
Position
990910..991569
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AA seq
219 aa
AA seq
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MSTPLSQPAAASSSATHVTTKIAAKSDNNLVWLDMEMTGLSPENDRIIEVAMVVTDSELN
VLAEGPVLVIHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVP
KSKSPMCGNSICQDRRFMARYMPKLEAYFHYRNLDVSTLKELCKRWQPAIAKGFIKRQQH
TAYADIVESIEELRYYRQHFIRDVPQTPEAEALASSVAP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccctctttcccagccggctgcggcatcttcgagcgccacccacgtcaccacc
aaaatcgccgccaagagcgacaacaacctggtctggctcgacatggagatgaccggcctg
agccccgagaacgaccgcatcatcgaggtggccatggtcgtcacggactcggagttgaac
gtgctggccgaaggcccggtgctggtgatccaccagccggacgagatcctcgacggcatg
gatgcctggaacaagggcacgcacggccgctcgggcctgatcgacaaggtgaaggcctcg
actaccaccgaagcgcaggccgaagccgatctgctggacttcctgaagaagtgggtgccc
aagagcaagtcgccgatgtgcggcaactccatctgccaggaccgtcgcttcatggcgcgc
tacatgcccaagctggaggcgtacttccactaccgcaacctggacgtctccacgctcaag
gaactttgcaaacgttggcagccggccatcgccaagggcttcatcaagcgccagcagcac
accgcgtacgccgacatcgtcgaatcgatcgaagaactgcgctactaccgccagcatttc
attcgcgacgtgccgcagacgccggaagccgaagcgctggcctcctcggtcgcgccgtaa
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