Ralstonia pseudosolanacearum RS 476: CDC45_06650
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Entry
CDC45_06650 CDS
T05645
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpu03016
]
CDC45_06650
Enzymes [BR:
rpu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CDC45_06650
Transfer RNA biogenesis [BR:
rpu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CDC45_06650
Prokaryotic type
CDC45_06650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AST26903
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All DBs
Position
1375281..1376225
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AA seq
314 aa
AA seq
DB search
MTEQRPSQQAKQPRRDVHGVLLLDKPIGWSSNDALIRAKRLLWAKKAGHTGTLDPLATGL
LPLCFGEATKFSQDLLEADKTYEAVVRLGIRTSTADAEGEVLSERPVAVTPEQLRAAIGR
FVGEIDQVPPMHSALKKDGKPLYEYARAGQTVERAARRVTIRAIDVLATDLDAAAPTVTL
RVCCSKGTYIRTLGEDLGEALGCGAHLVALRRTQVGSLTLDGAVTLEALEAASEDQRAAL
LAPVDALLQTLPRVELGAEDSRRFLHGQRLPLQLSLPSAEQVRVYGARGEAGASLLGVAA
WQGGVLRPERLVHL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcaacgcccgtcccaacaggcgaagcagccgcgccgcgacgtgcacggcgtg
ctgctgctggacaagccgatcggctggtcgagcaacgatgcgctgatccgcgccaagcgc
ctgctgtgggccaagaaggccgggcataccgggacgctcgatccgctggcgaccggcctg
ctgccgttgtgcttcggcgaggcgaccaagttctcgcaagacctgctcgaggccgacaag
acgtacgaggccgtggtgcgcctgggcatccggaccagcacggcggatgccgagggcgag
gtgctgagcgagcggcccgtggcggtgacgcccgagcagttgcgcgccgccatcggccgc
ttcgtcggcgagatcgaccaggtgccgccgatgcattcggcgctgaagaaggacggcaag
ccgctgtacgaatacgcgcgcgccggccagacggtcgagcgcgcggcgcgccgggtgacc
atccgcgccatcgacgtattggccaccgatctcgatgccgccgcgccgacggtgaccttg
cgcgtgtgctgcagcaagggcacctacatccgcacgctcggcgaggatctcggcgaggcg
ctgggctgtggcgcccacctcgtcgcgttgcgccgcacgcaggtcggcagcctcacgctg
gacggcgcggtgacgctggaagcgctggaggcggcgtccgaggaccagcgtgccgcgctg
ctggcgccggtcgatgcgttgctgcagaccttgccgcgcgtcgagctcggcgccgaggac
agccgccgcttcctgcacgggcagcgcttgccgctgcagctgtcgctgcccagtgcggag
caggtgcgggtctatggcgcgcgtggcgaggccggtgcctcgctgctgggcgtggcggcg
tggcagggcggcgtgctgcggcctgaacgcctcgtgcatctctga
DBGET
integrated database retrieval system
