Ralstonia pseudosolanacearum RS 476: CDC45_08940
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Entry
CDC45_08940 CDS
T05645
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CDC45_08940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpu02000
]
CDC45_08940
Transporters [BR:
rpu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CDC45_08940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
nSTAND_NTPase5
nSTAND3
AAA_22
AAA_25
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AST27314
LinkDB
All DBs
Position
complement(1855380..1856471)
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AA seq
363 aa
AA seq
DB search
MKTDDVIVSFRGVRKTYDGETLVVKHLDLDIYQGEFLTLLGPSGSGKTTCLMMLAGFEFP
TGGEIRLEGTLLNTVPPHKRNIGMVFQNYALFPHLTVAQNVEYPLTVRKLAAAERAERVH
HALKMVRMEGFAKRYPAQLSGGQQQRIALARALVFEPKLVLMDEPLGALDKQLREHMQYE
LKSLHEKLGVTFVYVTHDQGEALTMSDRVAVFDKGVVQQLDTVDRLYESPCNAFVANFIG
DSNTLRGTVVGLDGDYCQLQLNDGARVIGRNVAGAPVGAAAVGCIRPERMRLAEPADAGA
GNALAGQTRGLVYFGDHVRMRCALPEQAECFVKVPLGTRALESFAPGAPIRLEFAPEHLR
VFT
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgacgacgtgatcgtcagctttcgcggtgtgcgcaagacctacgacggcgag
accctggtggtcaagcacctggacctggacatctatcagggcgagttcctgacgctgctc
ggcccgtccggctccggcaagacgacctgcctgatgatgctggccggcttcgagtttccg
accggcggcgagatccgcctcgaaggcaccctgctcaacaccgtgccgccgcacaagcgc
aacatcggcatggtgttccagaactacgcgctgttcccgcacctcacggtcgcgcagaac
gtcgagtacccgctcaccgtgcgcaagcttgccgccgccgagcgcgccgagcgtgtccac
catgccctgaagatggtgcgcatggagggcttcgccaagcgctatcccgcgcagctctcc
ggcggccagcagcagcgcatcgccctggcgcgcgcgctggtgttcgagcccaagctggtg
ctgatggacgaaccgctcggcgcgctcgacaagcagctgcgcgagcatatgcagtacgag
ctgaagtcgctgcacgagaagctgggcgtgaccttcgtctacgtcacgcacgaccagggc
gaggcgctgaccatgtccgaccgcgtggccgtgttcgacaagggcgtggtgcagcagctc
gacacggtcgaccgcctctacgaatccccctgcaacgcattcgtcgccaacttcatcggc
gacagcaacacgctgcgcggcactgtcgtcggcctcgacggcgactactgccaactgcaa
ttgaacgacggcgcgcgcgtgatcggccgcaacgtcgccggcgcgccggtcggggccgcc
gccgtcggctgcatccggcccgagcgcatgcgcctggccgagcccgccgatgccggcgcc
ggcaacgcgctcgccggccagacgcgcggcctggtgtatttcggcgaccacgtccgcatg
cgctgcgccctgcccgagcaggcggagtgcttcgtcaaggtgccgctcggcacgcgcgcg
ctcgaatcgttcgcgccgggcgcgccgatccggctggaattcgcgcccgagcacctgcgc
gtcttcacctga
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