Ralstonia pseudosolanacearum RS 476: CDC45_10100
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Entry
CDC45_10100 CDS
T05645
Symbol
nodI
Name
(GenBank) nodulation factor ABC transporter ATP-binding protein NodI
KO
K09695
lipooligosaccharide transport system ATP-binding protein
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDC45_10100 (nodI)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpu02000
]
CDC45_10100 (nodI)
Transporters [BR:
rpu02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
CDC45_10100 (nodI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_22
AAA_23
AAA_30
MukB
AAA_16
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
AST27529
LinkDB
All DBs
Position
2148368..2149333
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AA seq
321 aa
AA seq
DB search
MRYEQPPGPGIGSTPILSVEGLRKRYGEQTVVDGLSFSVRRGQCFGLLGPNGAGKTTTLR
MLLGMTMPDAGTLQLCGETIPGHAHRARMRVGVVPQFDNLDPDFTVSENLQIFGRYFGLP
AATIRKRMPGLLEFARLEQKADAPVRALSGGMRRRLTVARSLINDPDVLVMDEPTTGLDP
QARHLIWERLRSLLASGKTILLTTHFMEEAERLCDELCVIDNGRKIAQGKPHELITHEIG
CDVVEVYGDDLPALRTLLAPLAERVEASGETLFCYARDPQPLVATLRSQTETHAMPGLRY
LHRPANLEDVFLRLTGREMRD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatacgagcaaccgcccggcccgggcatcggcagcacgccgatcctcagcgtcgaa
ggactgcgcaagcgctatggcgagcagacggtggtcgacggcctgagcttttcggtccgc
cgcggccagtgcttcggactgctcgggcccaacggcgcaggcaagaccaccacgctgcgc
atgctgctcggcatgacgatgcccgatgcgggcaccctgcagctgtgcggcgaaaccatc
cccggacatgcgcaccgcgcgcgcatgcgcgtgggcgtggtgccgcagttcgacaacctc
gaccccgatttcaccgtctcggaaaacctgcagatcttcggccgctacttcggcctgcct
gccgcgaccatccgcaagcggatgccgggcctgctggaattcgcgcggctcgagcaaaag
gccgacgcgcccgtgcgcgccctgtcgggcgggatgcggcggcggctgacggtcgcgcgc
tcgctgatcaacgaccccgatgtcctggtgatggacgagcccaccaccgggctcgacccg
caggcgcgccacctgatctgggaacgcctgcgctcgctgctggcctccggcaagaccatc
ctgctgaccacgcacttcatggaagaggccgagcgcctctgcgacgaactgtgcgtgatc
gacaacggccgcaagatcgcccaaggcaagccgcacgagctgatcacccatgagatcggc
tgtgatgtcgtggaggtctacggtgacgacctgcccgcgctgcgcacgctgctcgccccc
ctggccgagcgcgtcgaagccagcggcgaaacgctgttctgctacgcccgcgatccgcag
ccgctggtggccaccctgcgctcgcagaccgagacgcacgccatgcccggcctgcgctac
ctgcaccgcccggccaacctcgaagatgtgttcctgcgcctgaccggccgcgagatgcgc
gactga
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