Ralstonia pseudosolanacearum RS 476: CDC45_13375
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Entry
CDC45_13375 CDS
T05645
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDC45_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpu03019
]
CDC45_13375
Enzymes [BR:
rpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CDC45_13375
Messenger RNA biogenesis [BR:
rpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CDC45_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
PrnB
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AST28137
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All DBs
Position
2829842..2831386
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AA seq
514 aa
AA seq
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MIKKLINRLLGRPAAETAPATEPGTPARKARAPKTPKARAKAAAGGVPRAPRVWSVEEHG
IDPKLLSRNAVKVTSTLQEAGYDAFIVGGAVRDLLLGIKPKDFDVATNATPEQVEALFRR
SRIIGRRFQIVHVTFYGGREQEIIEVSTFRALVDAVESEQVPAGKRVKRTELDHHTHAVD
ASGRVLRDNVWGTQAEDATRRDFTVNAMYYNPADQTVHDYHRGMEDMRARLLRMIGDPHT
RYREDPVRMLRVVRFAAKTGFDIDPATRAPIAELGPLIHNVPAARLFDEMLKLLMSGHAW
ASLQELRKAGLHRGLLPLLDVALEQPMGQRFVQLALDNTDERVKAGKPVSPGFLFASLMW
HHVLEHWNRRRAAGEPLIPALHEAMDEVLDRQTEQLAIQRRFTADMKEIWSMQPRFEKRV
GRMPHRLLESPRFRAGYDFLVLRCASGELPQELAAWWTDFQNGDGEAREALIAQAKQAPA
AAGGAPAGAKRRRRRGPAKSDTVADVNPGSSEGT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcatcaatcgcctgctgggcaggcccgccgcggagaccgcgcccgcc
accgagcccggcacgccggccaggaaggcccgcgcccccaagaccccgaaggcgcgcgcc
aaggccgccgccgggggcgtgccgcgcgcgccgcgcgtgtggagcgtggaagagcacggc
atcgacccgaagctgctgtcgcgcaacgccgtcaaggtcacgtccacgctgcaggaagcc
ggctatgacgccttcatcgtgggcggcgcggtgcgcgatctgctgctgggcatcaagcca
aaggacttcgacgtcgccaccaacgccacgcccgagcaggtggaggcgctattccgccgc
tcgcgcatcatcggccggcgcttccagatcgtgcacgtgacgttctacggcgggcgcgag
caggagatcatcgaggtgtcgaccttccgcgcgctggtcgacgccgtggaaagcgagcag
gtaccggccggcaagcgcgtcaagcgcaccgagctggaccaccacacccacgccgtcgac
gccagcggccgcgtgctgcgcgacaacgtgtggggtacccaggccgaggacgccacccgc
cgcgacttcaccgtcaacgcgatgtactacaacccggccgaccagaccgtgcacgactac
caccgcggcatggaagacatgcgcgcgcgcctgctgcgcatgatcggcgatccgcatacg
cgctaccgcgaagacccggtgcgcatgctgcgcgtggtgcgcttcgcggccaagaccggc
ttcgacatcgatccggccacgcgcgcgccgatcgccgagctggggccgctgatccacaac
gtgccggccgcgcggctgttcgacgaaatgctcaagctgctgatgtcgggccacgcctgg
gcatcgctgcaggagctgcgcaaggccggcctgcaccgcggcctgctgccgctgctggac
gtggcgctcgagcagccgatgggccagcgcttcgtgcagctggcgctcgacaacaccgat
gagcgcgtcaaggccggcaagccggtctcgcccggcttcctgttcgcctcgctgatgtgg
caccacgtgctggagcactggaaccgccgccgcgccgccggcgagccgctgatccccgcg
ctgcacgaggcgatggacgaagtcctcgaccgccagaccgagcagctcgccatccagcgc
cgcttcaccgccgacatgaaggagatctggagcatgcagccgcgcttcgagaagcgtgtt
ggccgcatgccccaccgtctgctcgaatcgccgcgcttccgcgccggctacgacttcctg
gtcctgcgctgcgcctcgggcgaattgccgcaggagctcgccgcctggtggaccgacttc
cagaacggcgacggcgaggcgcgcgaagcgctgatcgcgcaggccaagcaggcgccggcc
gccgccgggggcgcccccgcgggcgccaagcgccgccgccggcgtggtccggcaaaatcg
gatacagtcgccgacgtgaacccgggcagttcggagggaacgtga
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