Ralstonia pseudosolanacearum RS 476: CDC45_15150
Help
Entry
CDC45_15150 CDS
T05645
Name
(GenBank) secretin
KO
K02666
type IV pilus assembly protein PilQ
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rpu02044
]
CDC45_15150
02035 Bacterial motility proteins [BR:
rpu02035
]
CDC45_15150
Secretion system [BR:
rpu02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
CDC45_15150
Bacterial motility proteins [BR:
rpu02035
]
Pilus system
Pilus assembly proteins
CDC45_15150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AST28467
LinkDB
All DBs
Position
complement(3203125..3205269)
Genome browser
AA seq
714 aa
AA seq
DB search
MTMRRVKGGLVQAVRVARGGAVAWLSLCMLMVGGQALAQQAITAPASNAVERVEQASTGE
STVVTVTLKDTPAQKPVEFSTQQPARIAIDFFGTAFAQGRANYQYGGKLLRAASVVQIGD
RTRVVLDLARQSQYKSEIRGNQYVLTLGAAPTASATPVPTFAAPAPTAGVERPSVRNIDF
RRGEELAGRVVVDLSTSNSAINIAQQGQNLVVDFAGATLPQSLRRRFDVSDFGTPVQAMR
ATDNGTGARLVIEPRGNWQYSSYQTDTQFVVEVRPTKEDPNKLISGPGYRGERMSLNFQN
IDIRSLLQVFADFTNLNIVTSDSVTGTLSLRLKDVPWDQALQIVLDSKGLASRRNGNVLW
VAPRNELATKEKAELESQQQVTELEPLRSQVFRLNYQRADDVRNMLLGTGGTAGGGAAAS
RILSKRGSLTSDARTNQLFVSDIPSKLEEVQAFLLKIDIPVRQVMIEARIVEADDTFSRN
LGAKLGFAAKTNGAGYGNTYSNVVSPVTKDATWDNSAAVSLPANGINGVNAASVAVSLFN
AGAGRFLALELSALEADGRGKIISSPRVVTADNIKALIEQGTEVPYQQATSSGATSVSFK
KANLKLEVTPKITPDGNVFLDVDVNKDSLGTQTTNGFAINTKHVQTQVLVENGGTVVIGG
IYTQNERTDVNKVPLLGDIPVLGNLFKSTAKTNDRTELLVFLTPRVLSDQLSLK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcgtcgcgtgaagggcggcctggtgcaggccgttcgagtggcccgggggggc
gcagtggcatggctttcgctgtgcatgctgatggtgggtggacaggcgttggcccagcag
gcaatcacggcgccggcaagcaatgccgtcgaacgcgtggaacaagcctcgacaggcgaa
tccaccgtggtgacggtgacgctgaaggacacgcccgcccagaagccggtggaattcagc
acgcagcagcctgcgcgcatcgccatcgacttcttcggcacggcattcgcccaggggcgt
gccaactatcaatatggcggcaagctgctgcgcgcggccagcgtggtgcagatcggtgac
cgcacccgcgtcgtgctggatctggcgcgccagtcgcagtacaagtccgagatccggggc
aaccagtacgtgctgacgctgggcgccgcgccgacggcgtcggccaccccggtgccgacc
ttcgccgcgcccgcgccgacggccggtgtggagcggccgtccgtgcgcaacatcgacttc
cgccgtggcgaagaactggccggccgcgtggtggtcgacctgtcgacgtccaactccgcg
atcaacatcgctcagcaggggcaaaacctggtggtcgatttcgccggtgccacgctgccg
caatcgctgcgtcgccgctttgacgtgagcgacttcggcacgccggtgcaggccatgcgc
gccaccgacaacggcacgggcgctcgcctggtcatcgagccgcgcggcaactggcagtac
agctcgtaccagaccgacacgcagttcgtggtggaagtccgcccgaccaaggaggacccg
aacaagctgatctccggtccgggctatcgcggggagcgcatgtcgctgaacttccagaac
atcgacattcgttcgctgctgcaggtctttgccgacttcaccaacctgaacatcgtcacc
agcgacagcgtgacggggaccctgtcgctgcgtctgaaggacgtgccgtgggatcaggcg
ctgcagatcgtgctggattccaagggcctggcctcgcgccgcaacggcaacgtgctgtgg
gtggcgccgcgcaacgaactggcgaccaaggagaaggctgagctggagtcgcagcaacag
gtgaccgagctggagccgctgcgcagccaggtgttccgtctgaattaccagcgtgctgac
gacgtgcgcaacatgctgctgggtaccggaggaacggcgggcggtggtgctgcggcgtcg
cgcatcttgtccaagcgtggctcgctgacgtcggatgcccgtaccaaccagctgttcgtc
tcggatatcccgagcaagctggaggaggtgcaggccttcctgctgaagatcgacatcccg
gtgcgtcaggtgatgatcgaggcgcgcatcgtcgaggccgatgacacgttcagccgcaat
cttggggcaaagctgggcttcgcggccaagaccaatggtgccgggtatggcaacacctac
agcaacgtggtgtcgccggtcacgaaagacgctacttgggataacagcgcggccgtcagc
ctgcccgccaatggcatcaacggtgtgaacgccgccagtgtggcagtgagcttgttcaac
gccggtgccggccgtttcctggcgctcgaactgtcggcgctggaagccgatggccgcggc
aagatcatctccagcccgcgtgtggtcaccgctgacaacatcaaggcgctgatcgagcag
ggtaccgaagtgccttaccagcaggcgacctcgtcgggtgcgacgtcggtttcgttcaaa
aaggccaacctgaaattggaggtgacgccgaagattacgccggacggcaacgtgttcctg
gacgtggacgtcaacaaggacagcctgggcacgcagaccaccaacggcttcgccatcaac
accaagcatgtgcagacccaggtgttggtcgagaacggcggtacggttgtgattggcggc
atctacacgcagaacgaacggaccgatgtgaacaaggtcccgctgctgggtgacatcccg
gtgctgggcaacctgttcaagagcacggccaagaccaacgaccggacggaactgctggtg
ttcctgacgccgcgcgtgctgtccgaccagctgtcgctgaagtaa
DBGET
integrated database retrieval system
