Ralstonia pseudosolanacearum RS 476: CDC45_15260
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Entry
CDC45_15260 CDS
T05645
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CDC45_15260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpu03021
]
CDC45_15260
03400 DNA repair and recombination proteins [BR:
rpu03400
]
CDC45_15260
Enzymes [BR:
rpu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CDC45_15260
Transcription machinery [BR:
rpu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CDC45_15260
DNA repair and recombination proteins [BR:
rpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CDC45_15260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AST28486
LinkDB
All DBs
Position
complement(3226082..3227062)
Genome browser
AA seq
326 aa
AA seq
DB search
MQTALLKPKIIAVEPLGDHHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSTIDGVQEDVVNLLLNLKGVVFKLHNRDEVTVSLRKEGEGVVTAADIELPHDVEI
INPGHVIASLSAGGKLDMQIKVEQGRGYVPGNVRKFGDESSKVIGRIVLDASFAPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTESAAEAA
AARAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLASRGLTLGMKLENWPPAGLEK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacagcactcctgaagcccaaaattattgcggttgagccgcttggcgatcatcac
gcgaaggtcgtcatggaaccgttcgagcggggctacggccatacgctcggcaacgcgctg
cgccgcgtgctgctgtcgtcgatggtcggctatgcgccgaccgaagtgacgatcgctggg
gtcgtccacgaatattccaccatcgatggcgtgcaggaagacgtcgtcaacctgctgctg
aacctgaaaggcgtggtgttcaagctgcacaaccgtgacgaggtcacggtgtcgctgcgc
aaggaaggcgaaggtgtggtcaccgcggcggacatcgagctgccgcacgatgtcgagatc
atcaatccgggccatgtcatcgccagcctgtcggccggtggcaagctggatatgcagatc
aaggtcgagcaaggccgcggctacgtgccgggcaacgtgcgcaagttcggcgacgagtcg
agcaaggtgatcggccgcatcgtgctggacgcctcgttcgcgccggtgcgccgcgtgtcg
tatgccgtcgagtccgctcgcgtcgagcagcgtaccgacctcgacaagctggtgatgaac
atcgagaccaacggcgtgatctcgcccgaggaagcgatccgccagtcggcgcgcatcctg
gtcgaccagctgtcggtgttcgcagcgctggaaggaaccgagagcgctgccgaagccgct
gccgcccgtgcaccgcagatcgatccgatcctgctgcgcccggtcgacgacctggagctg
accgtccgctcggcgaactgcctgaaggccgaaaatatttactatattggcgacctgatc
cagcgcaccgagaacgagctgctcaagaccccgaacctgggtcgcaagtcgctcaacgag
atcaaggaagtcctcgcttcgcgtggcctgacgctcggcatgaagctcgagaactggccg
cccgcaggcctggagaagtaa
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