Ralstonia pseudosolanacearum RS 476: CDC45_17175
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Entry
CDC45_17175 CDS
T05645
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpu03032
]
CDC45_17175
03036 Chromosome and associated proteins [BR:
rpu03036
]
CDC45_17175
03400 DNA repair and recombination proteins [BR:
rpu03400
]
CDC45_17175
DNA replication proteins [BR:
rpu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CDC45_17175
Chromosome and associated proteins [BR:
rpu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CDC45_17175
DNA repair and recombination proteins [BR:
rpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CDC45_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
Lmo2446-like_N
BON
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AST28828
LinkDB
All DBs
Position
3618368..3618646
Genome browser
AA seq
92 aa
AA seq
DB search
MTKTELIDAIASGVDGLTKAKAEQALNVTLQAIMESVGNGDTVSLIGFGTFSQGERAERM
ARNPRTGEEIKVEAAKTVKFKAGQKFKDAVNA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaccgaactgatcgacgccatcgccagcggcgtagacggtctgaccaaagcc
aaggcagaacaggcactgaacgtgacgctgcaggccatcatggaatccgttggcaacggt
gatacggtcagcctgatcggctttggcacattcagccagggcgagcgcgccgagcgtatg
gcacgcaacccgcgcaccggcgaagaaatcaaggtggaagccgccaagaccgtcaagttc
aaggccggtcagaaattcaaggacgccgtcaacgcctga
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