Ralstonia pseudosolanacearum RS 476: CDC45_17855
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Entry
CDC45_17855 CDS
T05645
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu00260
Glycine, serine and threonine metabolism
rpu00460
Cyanoamino acid metabolism
rpu00630
Glyoxylate and dicarboxylate metabolism
rpu00670
One carbon pool by folate
rpu00680
Methane metabolism
rpu01100
Metabolic pathways
rpu01110
Biosynthesis of secondary metabolites
rpu01120
Microbial metabolism in diverse environments
rpu01200
Carbon metabolism
rpu01230
Biosynthesis of amino acids
rpu01240
Biosynthesis of cofactors
rpu04981
Folate transport and metabolism
Module
rpu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CDC45_17855 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CDC45_17855 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CDC45_17855 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CDC45_17855 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CDC45_17855 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CDC45_17855 (glyA)
Enzymes [BR:
rpu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CDC45_17855 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
ZapD
Motif
Other DBs
NCBI-ProteinID:
AST29142
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All DBs
Position
unnamed:62005..63279
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AA seq
424 aa
AA seq
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MSNTQSFFSQSLAERDAPIRSSLLKELERQQSQVELIASENIVSRAVLEAQGSVLTNKYA
EGYPGKRYYGGCEYADEVESLAIDRVKQLFNAGFANVQPHSGAQANGAVMLALTKPGDTV
LGMSLDAGGHLTHGAKPALSGKWFNAMQYGVNRDTMLIDYEQVEKLAQEHKPSLIIAGFS
AYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHDNPVDHAHVVTSTTHKTLRGPR
GGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALKPEFKTYIDSVLANAKA
LGEVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGTQVEQALERAGITCNKNGIPFDTEKPT
ITSGIRLGTPAATTRGFGVAEFEQIGRLILEVFEALRANPDGDRATEHRVRSEIFALCDR
FPIY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacactcagtcattcttctcgcagtcgctggccgagcgcgacgcgcccatccgc
agctcgcttctgaaagaacttgagcggcagcaatcgcaagtggagttgatcgcgtcggag
aacatcgtgtcgcgcgccgtgctcgaagcacagggctcggtgttgaccaacaagtatgcg
gaaggctatccgggcaagcgctactacggcggctgcgaatatgcagacgaggtggaatcg
ctcgcgatcgaccgtgtgaagcagctctttaacgccggctttgccaacgtgcagccgcac
tcgggggcacaggcaaacggcgcggtcatgctggcactcaccaaaccgggcgacacggtg
ctgggcatgtcgctggatgcaggcggccacttgacgcacggggcaaagcctgccctgtca
ggtaaatggttcaacgccatgcagtacggcgtgaatcgcgacacgatgctgatcgactac
gaacaggttgaaaagctcgcgcaagagcacaaaccgagtttgatcatcgccgggttctcc
gcctacccgcgcaagctggatttcgcccgcttccgtgccattgccgacagcgtgggcgca
aagctgatggtcgacatggcgcacattgccggcgtgattgccgctggccgccatgacaac
cccgtcgatcacgcgcacgtcgtcacgtcgaccacgcacaagacactgcgtggcccgcgc
ggcggtttcgtgctgaccaacgatgaagagatcgccaagaagatcaactccgccgtgttt
ccgggcctgcagggcggcccgctgatgcacgtgattgcgggcaaggccgttgcgtttggc
gaggcgctcaagcccgagttcaagacctatatcgacagcgtgctggcgaacgcgaaggcc
ctgggcgaagtgctgaaggcgggcggcgttgacctggtcacgggcggcaccgacaaccat
ctgttgcttgttgacctgcggccgaaggggctcaaggggacgcaggtggagcaggcgctg
gagcgtgccggtatcacctgcaacaagaacggcattccgtttgacaccgagaaaccgact
atcacgtcgggcatccgccttggtacgccggcggccacgacgcgcggtttcggggtggcc
gagttcgagcagatcggccggctgatcctcgaggttttcgaggcgctgcgtgccaatccg
gatggcgacagggccaccgagcaccgcgtgcgcagcgaaatcttcgcgctgtgcgaccgc
ttcccgatctactga
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