Ralstonia pseudosolanacearum RS 476: CDC45_18395
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Entry
CDC45_18395 CDS
T05645
Name
(GenBank) type III effector protein
Organism
rpu
Ralstonia pseudosolanacearum RS 476
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AST29230
LinkDB
All DBs
Position
unnamed:184478..186637
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AA seq
719 aa
AA seq
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MRAGIEADIVLKGRIDERNIRAPAPSAAPPTPIDPDRAVSPPVGGHQAVRPAALADLAKA
PAASVSTDTAGSFSRRAALPAAPADPGDVLNKALKRIDVWKQLVVAEQDPRGRAWSPEEE
VQYASPVMKAVWTGLDALSALRMQGRATDSDANQKEVMLLTVLTKASDVVLDVRDRMLRA
EWAQLRAVQADTAEAESGPAEEEDPGPDFEQLPRWLDDLRQVRDALDEVMKRFKSSESPA
AVRAGLQPIMPAVTVQQSFCRTAMQTAHGIIISDRVGWLLMLAEWKGLPGVVARVGELRQ
ALRHRREEVAAASSALEAEADDSWKRRRPGVQSADRPTLQALLKHHEVLQDYGRQLDQVG
HDMCLDAATMIEMNDADGLWQCMMDIAHSIAGYQEGLEALCRAAGNVRPARVEPPPLRVA
EPPPPAEPAQPSGSSQRKHGKPGKQPGAIAGAVPAPRPVSVDKRTDTQKTADGLLRRYPV
DRKTLAQFDGDLVRIAQSLGRDTRTLQRELADPRRDAAITADYLRAVVQDWLGDVGKRGL
LREAVAALSSQDVRVGQLTGRIKALERIERRLDTMEADLLKRDACPRAPHLKRLLNAKEN
PIRSVGQPARLPAERPNDRLGTLFEMRIALKPLSNGQQVAPWVVHIHTREPVTADMLGTM
PSGDFAAVHLKTDWEKNLGPRWEAVMRALGYPEAKVHRGPIGMELLGQLFARVKLPASG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcgggcatcgaggccgacatcgtgttgaaaggacgtatcgacgaacgcaatatc
cgggcaccggcgccgtcggctgccccaccaactcccatcgaccccgaccgggccgtgagc
cctccggtgggcggacaccaggcggtccggcccgcggctttggcggatctggccaaggcg
ccggcggcgagcgtctccaccgatactgcgggcagcttttcacgacgcgccgcgttgccc
gcggcgccggccgaccccggcgacgtgctgaacaaggcgctgaaacgcatcgacgtctgg
aaacagttggtcgttgccgaacaggacccgcggggcagggcgtggagcccggaggaagag
gtgcaatacgcgagcccggtcatgaaggcggtctggacaggtctggatgcactctcggcg
ctgagaatgcaaggcagggcgacggacagcgatgccaaccaaaaggaagtcatgctgttg
accgtgctgacgaaggcgtccgacgtggtgctggatgtgcgcgatcgcatgctcagggca
gagtgggctcagctgcgggcagtgcaagccgatacggcggaggcggaatccggcccggca
gaggaagaggatccggggccggatttcgagcagttgccgcgctggctcgatgacctcagg
caggtccgcgatgcgctggacgaggtcatgaagcgcttcaagtcctccgaatcgccagcg
gcggtgcgagccgggctgcagccgatcatgccggctgtcaccgtccagcaatcgttttgc
cggaccgccatgcagacggcccacggcatcatcatttcggaccgcgtcggctggctgttg
atgctggccgagtggaagggattgccgggcgtagtcgcgcgggttggtgagctgcggcaa
gccctccgccatcggcgcgaggaggtggcagcggcaagttccgcgctggaggcggaagcg
gacgacagctggaagcggaggcggccgggtgtccagtccgcagatcgcccgaccctccag
gcgctgctcaagcatcacgaggtgttgcaggactacgggcgtcagctcgaccaggtcggc
catgacatgtgcctggacgctgccaccatgatcgaaatgaacgatgccgacggcctgtgg
cagtgcatgatggacattgcccactcgatcgccggttaccaggaaggcttggaggcgctg
tgtcgggcagccggcaacgtgcggcccgcgcgcgtcgagccgccgccgctgcgggtggcc
gaaccgccgccgcctgccgaaccggctcaaccgtccggcagttcgcagcgcaagcacggc
aagccgggcaaacagcccggtgccatcgctggggccgtgccggcaccgcggccggtctcc
gtggataagcgcaccgacacgcagaagacggccgacgggctcttgaggcggtatccggtc
gaccggaagaccctggcgcagttcgacggcgacctcgtccggattgcccagtcgctaggc
agggatacccgcacgctgcagcgcgaattggcggaccccaggcgcgacgctgcgatcacc
gccgattatctgcgcgccgtggtacaggactggctcggcgacgtcgggaagcgcggcctc
ttgcgcgaggccgtggcggcgctgtcctcgcaggatgtccgtgtcgggcagttgaccggc
cggatcaaggcgctggagcggatcgagcgtcggctggataccatggaggccgatctgctc
aagcgcgacgcgtgtccgagagcacctcacctcaagcggttattgaacgcaaaggagaac
ccgatccggtccgtcggccagccggcccggcttccggccgagaggccgaatgaccgcctg
ggcaccttgttcgagatgcgcattgcgctcaagccgctttccaatggccagcaggtggcg
ccgtgggtcgtgcacatccatacgcgcgaacccgtgacggctgacatgctcggcacgatg
ccgtccggcgacttcgccgcggtccacctgaagaccgactgggaaaagaacctgggcccg
cgctgggaggcggtgatgcgtgcgctgggttacccggaggcgaaggtacaccgcggtccc
atcggcatggagctgctcggccagctgtttgcgcgcgtcaagctgccggcttccgggtaa
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