Ralstonia pseudosolanacearum RS 476: CDC45_18890
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Entry
CDC45_18890 CDS
T05645
Name
(GenBank) sensor domain-containing diguanylate cyclase
Organism
rpu
Ralstonia pseudosolanacearum RS 476
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
dCache_1
PAS_8
HAMP
Motif
Other DBs
NCBI-ProteinID:
AST29315
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All DBs
Position
unnamed:328067..331603
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AA seq
1178 aa
AA seq
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MPKHAFFPTTLRGRLLALAAVAALPAVVVAIAGVALYRDRLTDHLEQRLSYETQSAAARV
GMVLSNADQLLSVVVADESVLRLDRDECTRFVSRVIHNQSDFATLGVADAHGKLVCTPVP
GAIGLDVADREFFRELIATGRPSLSNFLTGRTSHQPVIVATRAVVGPDGGIRGVAYAAIR
QSALMVAAGSASSGPVYLVDGAGTVLSGTHAALSGEGPGVTRGDLVSAAGPEPGATVFET
DADGTLRAYAAMAVPHATSGRLRLVRGIDATDMARQQRDVTLAGGGAIVLMLVLLLALIQ
MAMRRLVLPRVDALVDAARHYAAGDFSARVAEQGGARDELSLLERTFNEMRTAILRHDET
VHHLTERFQRVARATNDWIFDWDIATGESWANASLHRLLGSDALLAQGDEDGVSRTLTFQ
QFVHPEDMAAFGRGLRAALHSDRDAWHHVCRVIDASRAVRTVEIRASIYRGKDGRAVRMV
GGVTDISQRSAMEADLRASEANLRVAEQIALLGSWRWDVLRDTATWSSGMYLLTGVSPGP
PPSFAQQAQFFTGDSYNRLREAASRAVTEGVPYSLELEMIRRDGEHRWVLSRGNIERNER
EEVVALFGTMQDITERRESDEQLRLLRRVVESVPSGITVADAQQPDLPLVYVNPGFERMT
GYRAEEVLGRNCRFLHSSEPGQPALNEVRAALRDASEIRVLLRNFRKDGHAFLNNFLLSP
VRDSQGAVTHYVGIQDDVTEQEMTRARLAQHATVDPLTGLPNRTLLADRVQQGVEMAARQ
RSRFYVALINIDRFKVVNDSLGHLLGDEVLRRIAERLRDAADTVDTVARFGGDVFALVIS
HAGSHGTDLGFDLFAEPIRVEGHEVFVTASIGVAEYPAHGSDSETLVRHAEMAMYFAKQN
GRNRLEFFAPEMDIGVSYRLNLEHQIRAALEQGQFRLLYQPQIDTKTGRICGLEALIRWI
HPTRGLLPPAAFIPVAEESGLVVEIGNWVLAEAAQQRAAWHARGLGEDLTIAVNVSPLQF
KRGTVLPTLLRLQRQHGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAIDDFGT
GYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGVEDAAQ
SAFLASHQCDVLQGYYFSEPLLPEAVTALLERDARFTV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagcatgctttctttcccaccacgctgcgcggtcgcttgctcgccttggccgct
gtggccgcgttgccggccgtcgtcgtggcgatcgccggcgtggcgctctatcgggaccgg
ctgaccgatcacctcgaacaacgtctctcgtacgaaacccagagcgccgcggcgcgcgtg
ggcatggtgctgtccaacgcggaccagctgctgtcggtcgtggtggcggacgaatccgtc
ctgcgcctggaccgcgacgaatgcacccgcttcgtcagccgcgtcatccacaaccagagc
gacttcgccacgctgggcgttgccgatgcgcacggcaagctggtgtgcacgccggtgccg
ggggccatcgggctcgatgttgccgaccgcgagttttttcgcgagctgattgcgacaggg
cgtccgtcgctgtcgaatttcctgaccggccggacttcgcaccagcccgtcatcgttgcg
acgcgcgccgtggtcggccccgacggcggcatccggggcgtggcctacgcggcgatccgg
cagagcgcgctgatggtggcggccggcagcgcgtcgtcggggccggtctacctggtggac
ggcgcgggcacggtgctgtccggcacgcatgccgccctgtccggcgaggggcccggcgtc
acccggggcgacctggtgagcgcggccggccccgagcccggcgccacggtcttcgagacc
gacgccgacggcacgctgcgcgcctatgccgcgatggccgtgccccatgcgaccagcggg
cggctgcgcctcgtgcgcggtatcgatgcgaccgacatggcgcgccagcagcgcgacgtg
acgctggccggcggcggcgccatcgtgctgatgctggtgttgctgctggcgctgatccag
atggcgatgcggcgcctggtgctgccgcgcgtcgatgcgctggtcgatgccgcacggcac
tatgccgcgggtgacttctccgcgcgcgtggccgagcagggcggcgcccgcgacgagctg
tcgctgctcgagcgcaccttcaacgagatgcgcacggccatcctgcgccacgacgagacc
gtccaccacctgaccgagcgcttccagcgcgtggcgcgcgccaccaacgactggatcttc
gactgggacatcgccacgggcgagtcctgggccaacgccagcctgcaccgcctgctcggc
agcgacgcgctgctggcgcagggcgacgaggacggcgtgtcgcgcacgctgaccttccag
cagttcgtgcatcccgaagacatggcggcattcggccggggcctgcgggccgcgctgcat
tcggatcgcgatgcctggcaccacgtctgccgcgtgatcgacgccagccgcgcggtgcgc
acggtggagatccgcgccagcatctatcgcggcaaggacgggcgcgccgtgcgcatggtc
ggcggggtcaccgacatctcgcagcgctcggccatggaggcggatctgcgcgccagcgag
gccaacctgcgcgtggccgagcagatcgccctgctcggcagctggcgctgggacgtgctg
cgcgacaccgccacctggtcgtcgggcatgtacctgctgaccggcgtgtcgccggggccg
ccgccgtcgttcgcgcagcaggcgcagttcttcaccggcgacagctacaaccgcctgcgc
gaggcggccagccgcgccgtcaccgagggcgtgccgtactcgctggagctggagatgatc
cgccgcgacggcgagcaccgctgggtgctctcgcgcggcaacatcgagcgcaacgagcgc
gaagaggtggtggcgctgttcggcaccatgcaggacatcaccgagcggcgcgagtccgat
gagcagttgcgcctgctgcggcgcgtggtcgagtcggtgccgtcgggcatcaccgtggcc
gatgcgcagcagccggacctgccgctggtctacgtcaaccccggcttcgagcgcatgacc
ggctaccgcgcggaggaggtgctgggccgcaactgccgcttcctgcattcgtccgagccg
gggcagcccgcgctgaacgaggtgcgcgccgcgctgcgcgatgccagcgagatccgcgtg
ctgctgcgcaatttccgcaaggacggccatgcgttcctcaacaactttctgctctcgccg
gtgcgcgacagccagggcgcggtcacacactacgtcggcatccaggacgacgtgaccgag
caggagatgacacgcgcgcgcctggcccagcacgccaccgtcgatccgctgaccggcctg
cccaaccgcacgttgctggccgaccgcgtgcagcagggggtggagatggccgcgcgccag
cgcagccgcttctacgtcgcgctgatcaacatcgaccgcttcaaggtcgtcaacgacagc
ctggggcacctgctgggcgacgaggtgctgcgccgcatcgccgagcgcctgcgcgatgcg
gccgacaccgtcgatacggtggcgcgcttcggcggcgacgtcttcgcgctggtgatctcg
cacgcgggctcgcacggcaccgatctcggtttcgacctgttcgccgagccgatccgcgtg
gaggggcacgaggtgttcgtgaccgccagcatcggcgtggcggagtatccggcgcacggc
tcggacagcgagaccctggtgcgccacgccgagatggcgatgtatttcgccaagcagaac
ggccgcaaccggctggagttcttcgcgcccgagatggatatcggcgtgtcgtaccggctg
aacctggagcaccagattcgcgccgcgctggagcagggccagttccgcctgctgtaccag
ccgcagatcgacaccaagaccggccgcatctgcggtctggaggcgctgatccgctggatc
cacccgacgcgcgggctgctgccgccggcggcgttcatcccggtggccgaagagagcggg
ctggtggtcgagatcggcaactgggtgctggccgaagccgcgcagcagcgcgccgcatgg
catgcgcgcgggctgggcgaggacctgaccatcgcggtcaacgtatcgccgctgcagttc
aagcgcggcaccgtgctgccgacgctgctgaggctgcagcgccagcatggcctgggctcg
ggctttctcgagctggaggtgaccgagtcgatgctgatggagggcaccgagcgcaccatc
gaagacctgaccgccattcgccagctgggggtgcgcatcgccatcgacgacttcggcacg
ggctattccagcctggcgtacctcaagcgcctgccgatcgacctgatcaagatcgaccgt
gccttcgtcaaggacatcgaccgcgactccaacgacgcggccatctgcacgacggtggtg
gtgctggcccacaacctgggcgtgaaggtgtgcgcggaaggcgtcgaagacgcggcgcag
tcggccttcctcgcctcccaccagtgcgatgtgctgcagggctattacttctccgagccg
ctgctgcccgaagccgtgacggcgctgctggagcgcgacgcgcgcttcacggtgtag
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