Ralstonia pseudosolanacearum RS 476: CDC45_24025
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Entry
CDC45_24025 CDS
T05645
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Pathway
rpu03420
Nucleotide excision repair
rpu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CDC45_24025
03430 Mismatch repair
CDC45_24025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpu03400
]
CDC45_24025
Enzymes [BR:
rpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CDC45_24025
DNA repair and recombination proteins [BR:
rpu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CDC45_24025
MMR (mismatch excision repair)
Other MMR factors
CDC45_24025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AST30238
LinkDB
All DBs
Position
unnamed:1613922..1616054
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AA seq
710 aa
AA seq
DB search
MPAAIPTPETAPAPDYLAQLNDQQRLAVEFGISGADAAQTGPLLVLAGAGSGKTHTLGWR
VAHLVANGADPQRILLLTFSRRAASELSSRAGHLLARALQGSAGARSAAGTAYRTALPWA
GTFHGIGARLLREYAERIGLAPDFTIHDRSDAADLLNVVRHELNLSTKERRFPLKQTCLA
IYSRAINAESPLDAVLKQHFPWCAMWQAQLRTLFDAYVEAKQAQHILDYDDLLLYWHAMV
ADAGLAAEIGARFDHILVDEYQDTNRLQSSILRALRPDGRGLTVVGDDAQSIYAFRAATV
RNILDFPRHFTRPAHTVLLERNYRSTQPILEASNGVMRFATERFAKTLWTDRASTHRPRL
ISVRDEAEQARCVAEQVLRHREGGLALKSQAVLFRTASHSAPLEIELARRNIPFVKYGGL
KFLEAAHVKDVLSVLRWAENPRNRIAGFRVIQLLPGAGPATAARVLDTMAEAADPVAALL
AHAPPARLAGDWAALMTLMATLRAPKDNATWAGELEAVGAWYAPHMERLHDDAAVRQGDL
DQLARMAATYASRERFLTEMTLDPPELTSDESGEPYRDEDYLILSTIHSSKGQEWKAVYL
LNAVDGCMPADLGAGSHDELEEERRLLYVAMTRARDHLDILVPQRFYMTQQTPNGDRHLY
ASRTRFIPPALLPLFEACAWPPPEPGADPAAEARAAAKVDLAKKMRGYWR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccgccatccccaccccggaaaccgcccccgcgcccgactacctggcgcaactg
aacgaccagcagcgcctggccgtcgagttcggcatttcgggggcggatgcggcgcagaca
ggcccgctgctggtgctggcgggcgcgggctccggcaagacgcatacgctgggctggcga
gtggcgcacctggtggccaatggcgccgatccgcagcgcatcctgctgctgacgttctcg
cgccgggcggcgagcgagctgtccagccgcgccggccacctgctggcgcgcgccctgcag
ggcagcgccggcgcgcggtcggccgccggcaccgcataccggaccgcgctgccctgggcc
ggcaccttccacggcatcggcgcgcgcctgctgcgcgaatacgctgagcgcatcggcctc
gcgcccgatttcaccatccacgaccgcagcgacgcggccgacctgctcaatgtcgtgcgg
catgagttgaacctgtcgaccaaggaacgccgcttcccgctcaagcagacctgcctggcc
atctactcgcgcgccatcaatgccgagagcccgctggatgccgtgctcaagcagcacttc
ccgtggtgcgcgatgtggcaggcgcagctgcgcacgctgttcgacgcctacgtggaggcc
aagcaggcccagcacatcctcgactacgacgacctgctgctgtactggcacgcgatggtg
gccgacgccggcctggccgccgagatcggcgcgcgcttcgaccacatcctcgtcgacgaa
taccaggacacgaaccggctgcagtcgtcgatcctgcgcgcgctgcggcccgacgggcgc
ggcctgacggtggtcggcgacgatgcgcaatccatctacgccttccgcgcggcgacggtg
cgcaacatcctcgacttcccgcgccacttcacgcggccggcgcacacggtgctgctggag
cgcaattaccgctccacacagccgatcctggaggcgtccaacggcgtgatgcgctttgcc
accgagcgcttcgccaagacgctgtggaccgaccgcgcatcgacccaccgcccgcgcctg
atctcggtgcgcgacgaggccgagcaggcgcgctgcgtggccgagcaggtgctgcggcat
cgcgagggcgggctggcgctgaagtcgcaggccgtgctgttccgcaccgccagccacagc
gcgccgctggagatcgagctcgcccgccgcaacatccccttcgtcaaatacggcggactc
aaattcctggaggccgcgcacgtcaaggacgtgctgtcggtgctgcgctgggccgagaat
ccgcgcaaccgcatcgccggcttccgcgtcatccagctgctgccgggcgccggccccgcc
accgccgcgcgcgtgctcgataccatggccgaggcggccgacccggtcgccgcgctgctg
gcccatgcgccgccggcacgcctggccggcgactgggcggcgctgatgacgctgatggcc
acgctgcgcgcaccgaaggacaacgcaacctgggccggtgaactggaggccgtcggcgcc
tggtacgccccccacatggagcgcctgcacgacgatgcggccgtccgccagggcgatctc
gaccagctcgcccgcatggccgcgacctacgcctcgcgcgagcgcttcctgaccgagatg
acgctcgacccgcccgagctgaccagcgatgaatccggcgagccgtaccgcgacgaggac
tacctgatcctgtcgaccatccactcctccaaggggcaggagtggaaggccgtctacctg
ctcaacgccgtggacggctgcatgcccgccgacctgggcgccggctcgcacgacgagctg
gaggaagagcgccggctgctctacgtggccatgacgcgcgcccgcgaccacctcgacatc
ctggtgccgcagcgcttctacatgacccagcagacgcccaacggcgaccgccacctctac
gcatcgcgcacgcgcttcattccgccggcgctgctgccgctgttcgaggcctgcgcctgg
ccgccgcccgagcccggcgccgacccggcggccgaggcacgcgcggcggccaaggtcgac
ctggccaagaagatgcgcggctattggcggtag
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