Ralstonia pseudosolanacearum RS 476: CDC45_25365
Help
Entry
CDC45_25365 CDS
T05645
Name
(GenBank) hemagglutinin
KO
K15125
filamentous hemagglutinin
Organism
rpu
Ralstonia pseudosolanacearum RS 476
Brite
KEGG Orthology (KO) [BR:
rpu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rpu00536
]
CDC45_25365
Glycosaminoglycan binding proteins [BR:
rpu00536
]
Heparan sulfate / Heparin
Microbial pathogens
CDC45_25365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
AST30478
LinkDB
All DBs
Position
unnamed:complement(1927612..1935825)
Genome browser
AA seq
2737 aa
AA seq
DB search
MRQPVTARARAALEQPRAIALQQEQHGASAGTADPVSRHDRARRSFVARSIAAAVALISW
LGPVQVSWQVARQSAATIALHGTTVDSPFTSWRTTGRLLVRWGLRQAQAGAITDPTAPIR
FTPTLTQTTGQGGGVPVINVTTPNASGLSYNLLRSLTVDGVGLILNNSLAGGGTFLGGNV
GGNANLAASGPASTILTQVTGTEPIRINGTVEVFGSPASVIFAAPAGVYTQGAGFTNTPR
VTLSTGTPQFLNGSGANVAFDQATAVGFLVNSGRIQIEPAAGSTAGAGIEGTVGAINLIG
QTVGVNAPLFAGNQINVIAGNQQVAPVATGTGRAGSDWQVSGAGANAAANSASAQNGLAI
DATAFGAMTAGQIKLISTAQGLGVRAAGDLAANTSNVNIDANGDVSVGNVYGQQTAGITT
TGSVSTSGAVRAQQDVTIGAGGDVTLGGAAQAGNNVTVSAGGNVAGSGDLAAVHGLSVSA
GNSANLGGNLNAASIAVTAQGKDGTGDITLGGKVASPGGIALNAARDTTIAGQLTGGSGV
SVNAGRNLSVSGAIGSVGDLNLAAAAGSVSTTGAVTTQANLTASAGQDVRLGGTTAANGH
VAIQANAGSITTAGTLTAAQDIALTAGQNATLGAATQTGGNLTVTAGNTVGGAGNLTASK
AIDVQAGGSVDVSGNVSANRIAMQAAGRDGVGDIRLGGNVGAPGTITLNAARDTTIAGSV
VSDSDLNLATQRNLSVGGVVGSTKGNVSLTARTGAVTTQGAVITPGNLVVSSGADTSLGG
QVSAAGTASVNAGGNLSTAGQIGSNGTLTLNAGQNLTIGGQVGSGADANLQAGSNVTVNG
ALTSTGNASVLAGQSIALAGDVAAGGNATLDASQTITGPGNLSAAQTAKVTGGSIDLGGQ
VKGKQVALTANGSGNLGDVRLGGAVGAPGSVTISATRDATLGSNAIAGGDLTATAGRNLT
VNGAAASVNGNVNLTAQAGQLASTGSIQANQGDVNATAGQGLNVGGSVYAGRNAGLVAQG
GNATVSGNLTSLGKASIGSGGNTTLSGQLKTGGDLQASAANALSVAQLNYVGGNAILRGT
DIAVGSAAGQSNAVQGTLDAVASRGLTLAGNSNANALNLGGATIVNQGSTLATQRATVSG
GMVTNAGMLAANQLTVSATDLVNRGTVGGQAVKLNTTGNLDNAGGLVVGSQTLDVTAGAL
TSNRGGTFFGGDLAGKSPTTGNLTFTVNGGAGSFNNAGGQLLAGNNLTLNTPNQAFDPSA
ATAGTLNANNTLTLSIQSINNTGTWNVQGSSVAINAAQGIFNSGTIQKAGNLSLSTAGAL
ANSGQIVGGSNVALSAGTLTNTGTIHADGNLALAGNVRNAGTAEALGNIAVTGSNYDNQG
GKTQANGDIRFDIGGTLNNVGSVIGANGNVHIAAQSVVNDRTAPVDAGSSFGKAVNDALL
NSTIIGSYSPWVYGGSCDSCSAYVAGAPINVTIGDLVRNADGTTTLYLGPVAVSSENGPG
FESRWFMGYSGLTISPNDPDQKRVPLPTVDRTIVRQADGTAGQITAGGAMDVTAASVSNK
GGLIRAGKDVTLNVGSLDNSRSATLVSSQTDAVNAAELAAFLDRISAIARANTMSSFANS
AFLSSSQYLMFSKPDWQGSSCDSCTAPAPSAVVLDVGHAKEGAQVTAPVQSTVTYTLGKA
GQILSGGNLSLTGSGDLTNAGDLAAAGKVKITAAGTFTNQGTYVSSVTTTAGCLPGAIKC
AEGGAHVDTLNWQQTPNTVAAGDSLTINAASIQNLNGTLAAVGNVTLTAGSGVTNRAGAI
QSTAGDVSITAPTVVNTTMTPVTLHKSYGNMNPSYAGGCNAGGTYKESQCASDETTAAGP
AGVISAARDVNLSGTTLTNNGALITGGRNVTVNMAGNVDNNSIALNANWHGHWVEETGMF
SSDKRHETNGVAVLGNLASGIQAGNALSVTSGGATVNTGNLLGSTVDLTSAALVNGITSP
SQPTPPSVAGQQVISLAPTPAPSGSLPTANNTGTGPAAQAASATPTTSSASGGAPQASVT
PVQTPAWRFQPAIVTTPSAPGSTQVSWHFNAPAAGSAVSAFASTVSSTTYVNPNPATAVL
AGVTPDSLLSQLPADLRPGGTPFYYDPFTENQKLQQAALAQTGQSSFVNGLSYDSQNRLS
VTDQEKLILYRNAADYAKAHNIPLGQALPQQQIAQLDKPMLWYVTQQVPDPNCNTVASTA
CPMVSALVPQLYLPAGYADAITQPAGGMIAGTNVNVNVDGTLRNSGQIVAGDALNVHAGT
IDARPNVVNVGTSAYKVEGGWLEVSGTQVQPGGFMSAVNLNVTANAINAVNDAFAVRNAD
GSIDQAKTDALIAQLKANLGGNYTAGTVKDDIHQNFIKEQSALPTFVVMVIALVAAVVTA
GAAAAAIAAAEVAAAEAGMATLIATGSVEAATAAGGIMASSVFAAGGIANLAIAGALGGM
AASVVSQVGLTGRLSVGQTLIAGAAGAITGGMTGYFGANYGIDRLLASTAAGCGTAAMSG
GDCKSGAISGFATAAIAWAGDAMRQNQIESSKRFSGITDTKASELGPVDNASGPSAGVNG
DGYKIAGTRVSFDDLRKYGDVQQAADGSWTFTGTQVDPKTGTFWTLRDALQKEGGLTGGA
QGLSGTLSGAPYAPGTATDKLLESFAGPHDFMGSIFAYDKLGNLKQGMTALQRTLFEIQT
DIDIPLSAPFAGVTFLNQYGVDWSTFRNQFNQTKDKR
NT seq
8214 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagccggtcacggcccgcgcacgcgctgcgctggagcagccgcgtgccattgca
ctgcaacaagaacaacatggcgctagcgctggtaccgctgatcccgtcagccgccatgac
cgcgccaggcgctcgtttgtagcgcggtccatcgccgccgccgttgcgctcatcagctgg
ctcggcccggtgcaggtctcctggcaggtggcccggcagagcgccgccacgattgcactg
cacggcacaaccgtcgatagcccattcacgtcgtggcgcaccaccggccgcctgctggtg
cgctggggcttgcggcaggcgcaggccggcgccatcaccgatcccaccgcgccgatccgc
ttcacgcccaccctcacgcagaccacggggcagggcgggggcgtcccggttatcaatgtc
acaacgccgaacgccagcggcctgtcgtacaacctgctgcgctcgctgacggtcgatggc
gtcgggctgattctgaacaacagcctggccggcggcggcacgttcctgggcggcaatgtc
ggcggcaacgcgaacctggccgcgtccggcccggcctcgacgatcctgacgcaggtcacg
ggcaccgagccgatccgtatcaacgggaccgtggaggtgttcggttcaccggcctcggtc
atcttcgccgcgccagcgggtgtttatacgcagggcgcggggttcaccaatacgccacgg
gtgacgctgtcgaccggcacgccgcagtttctgaatggcagcggcgcaaacgttgcattc
gatcaggccaccgcggtgggctttctcgtcaacagcgggcgcatccagatcgaaccggcg
gcgggttcgacggccggcgcggggatcgagggcacggtcggggcgatcaacctgatcggc
cagacggtgggcgtcaacgcgcccttgttcgcgggcaaccagatcaacgtgatcgcgggg
aaccagcaggtcgcgccggtggcgacgggcacgggccgggcgggttccgactggcaggtg
agcggcgcgggcgccaatgcggcggccaacagcgcgagcgcgcagaacggcctggcgatc
gacgcgacggcgttcggcgcgatgacggcggggcagatcaagctgatctcgacggcgcag
gggctgggcgtgcgcgccgccggcgacctggcggccaataccagcaacgtcaatatcgat
gccaatggcgatgtcagcgtcggcaatgtgtacgggcagcagaccgccggcattacaacg
acggggtcggtgagcacgagcggcgccgtccgagcgcagcaggacgtgacgatcggggcg
ggcggcgacgtgacgcttggcggtgcagcgcaggcgggcaacaacgtgactgtgagcgcg
ggcggcaatgttgccggatcgggcgatctggctgccgtgcatggcttgagcgtgagcgcg
ggcaacagcgccaatctgggcggcaacctgaacgcggcaagcattgccgtgaccgcacag
ggcaaggatggcacgggtgatatcacgctgggcggcaaggtggcttcgcctggaggcatt
gcgctgaatgcggcgcgcgatacgacgatcgcggggcagttgaccggcggcagtggcgtg
tcggtcaacgccggccgcaacctgtcggtctccggagcgatcggcagcgtgggcgatctg
aatctcgccgccgctgcgggcagtgtgagcaccacgggtgccgtcaccacgcaagccaac
ctgacggcgagcgcggggcaggacgttcgcctgggcggcaccaccgccgccaacggccat
gtcgcgattcaggcaaacgccggcagcatcacgacggccggcacgctgacggccgcgcag
gacatcgcgctcaccgccgggcagaacgcaacgctgggtgccgccacccagaccggcggc
aatctgacggtcacggccggcaatacggtcggcggcgcgggcaatctcaccgcttccaag
gccatcgatgtgcaggcgggaggcagcgtcgatgtgagcggcaatgtcagcgcgaaccgg
atcgccatgcaggcagccggccgcgacggcgtcggcgacattcgtctgggcggcaacgtc
ggcgcaccgggcacgattaccctgaacgccgcgcgcgacaccaccattgccggcagtgtg
gtgtccgacagcgatctgaatctcgcgacccagcgcaatctgagcgtgggtggcgtggtc
ggcagtaccaagggcaatgtcagcctgaccgcgcgcacgggggcggtgacgacccagggc
gcggtcatcacgccgggcaatctggtcgtcagctcgggcgccgacaccagcctgggcggc
caggtcagcgcggcgggcacggccagcgtcaacgcgggcggcaatctgagcacggccggc
cagatcggcagcaacggcacgctgacgctcaatgccgggcagaacctcaccatcggcggc
caggtcggcagcggcgccgatgccaacttgcaggccggcagcaacgttaccgtcaacggc
gcgctgaccagcaccggcaatgccagcgtcctggccggccaatcgattgcgctggccggg
gatgttgccgcgggcggcaacgcgaccctcgacgccagccaaaccatcaccggcccgggc
aacctgagcgcggcccagaccgccaaggtgaccggcggcagcatcgatctgggcgggcag
gtcaagggcaagcaggttgcgctgacggccaacggcagcggcaatctgggtgacgtccgt
ttgggtggcgctgtcggcgcgcccggcagcgtgacgatctcggcgacacgcgatgccacc
ctcggcagcaatgcgattgccggtggcgacctgaccgccacggccgggcgcaatctgacc
gtcaacggcgctgccgccagcgtcaatggcaacgtcaacctgaccgcgcaggccgggcaa
ctggcgagcaccggttcgatccaggccaaccagggcgatgtcaacgcgaccgccgggcag
ggcctgaacgtgggcggcagtgtctacgccggccgcaacgccggcctcgtcgcacagggc
ggcaatgccacggtctcgggcaatctcaccagcctgggcaaggcgagcatcggcagcggc
gggaacaccaccctgagcggccagctcaagacgggcggcgacctgcaggccagcgccgcc
aacgcgctgagcgtcgcgcagctgaactacgtaggcggcaacgcgatcctgcgcggcacc
gacatcgcggtcggttcggcggcgggccaatccaatgcggtgcaaggcacgctggatgcg
gtcgcttcccgtgggctgacgctcgccggcaacagcaatgccaatgccctgaacctcggc
ggcgccacgatcgtcaaccaaggctcgacgctcgccacgcaacgggcgaccgtcagcggc
ggcatggtcaccaatgccgggatgctggccgccaaccagctcacggtcagcgcgaccgat
ctggtcaaccgtggcacggtgggcggccaggccgtcaagctgaacacgaccggcaacctg
gacaacgcaggcggcctggtggtgggctcgcagacgctcgatgtcacggccggcgcgctc
acgagcaatcggggcgggacgttcttcggcggcgatctggccggcaagtcgcccaccacc
ggcaacttgaccttcaccgtcaacggcggcgcgggcagcttcaacaatgccggcgggcaa
ctgctggccggcaacaacctgacgctgaacacgccgaaccaggccttcgatccgtcggcg
gcgaccgccgggacgctgaacgccaacaacacgctcacgctgtcgatccagtcgattaac
aacacgggcacgtggaacgtgcagggcagcagtgtggcgatcaatgcggcccagggcatc
ttcaacagcggcacgatccagaaggcgggcaacctgtcgctgtcgacggccggcgcgctg
gccaacagcggccagatcgtgggcggctcgaacgtggcgctgtcggccggcacgctgacg
aacaccggtacgatccacgccgacggcaatctcgcgctggcgggcaatgtccggaacgcc
ggcacggccgaagcgctgggcaacatcgccgtcaccggttccaactacgacaaccagggc
ggcaagacccaggccaacggcgacatccggttcgacatcggcggtacgctcaacaacgtc
ggcagcgtgatcggcgccaacggcaacgtgcacatcgccgcgcagagcgtcgtcaacgac
cgcaccgcgccggtggatgcgggcagcagcttcggcaaggcggtcaacgatgcgctgctg
aactcgaccatcatcgggtcgtactcgccgtgggtctatggcggcagctgcgatagctgc
agcgcttatgttgcgggtgcgcccatcaatgtcacgattggcgatctggtgcgcaatgcg
gacggcaccacaacgctgtatctcggcccggttgccgtcagctccgagaacggccccggc
ttcgagagccgctggttcatgggttacagcggactgaccatcagcccgaatgatcctgac
cagaagagggtccctctgccgacagtggaccggacgatcgtgcgccaggcggatggcacg
gccggccagatcacggccggtggtgcgatggatgttacggccgcatcggtctcgaacaag
ggcgggctgatccgcgccggcaaggacgtgacactcaatgtcggcagcctggacaacagc
cgctcggccacgctggtgagcagccagaccgacgcagtcaatgccgcggagcttgcggcg
ttcctggaccgcatcagtgccatcgcccgggcgaacacgatgtcgtcgtttgccaattcg
gccttcctgtcgagcagccagtatctgatgttcagcaaaccggattggcaagggtcgagc
tgcgacagctgcacggcgccggcgccttcggcggtggtgctggatgtcggccatgcgaag
gaaggtgcccaggtaacggcgcccgtccaatccacggtgacctacacgctcggcaaggcg
gggcagatcctgagcggcggcaacctgtcgctcaccggctcgggcgatctcaccaacgcg
ggcgacctggccgcagccggcaaggtcaagatcaccgcggcgggcaccttcaccaaccag
ggcacgtacgtgtcgtcggtgaccaccacggcgggctgcctgcccggcgcgatcaagtgt
gcagaaggcggcgcgcacgtcgataccctcaactggcagcagacgcccaacaccgtcgcg
gccggtgacagcctgactatcaacgccgcgagcatccagaacctgaacgggacgctggcc
gccgtgggcaacgtgacgctcacggccggcagcggcgtcaccaaccgcgccggcgcgatc
cagtcgacggctggtgatgtcagcatcaccgcgcccaccgtggtcaacacgaccatgacg
ccggtcacgctgcacaagagctacgggaacatgaacccgagctacgcgggcggctgcaac
gcgggcgggacgtacaaggaaagccagtgcgcctcggacgaaaccacggcagccggcccg
gccggcgtgatctcggccgcgcgcgacgtcaacctgtcgggcaccacgctgaccaacaac
ggcgcgctgatcaccggcgggcgcaacgtgacggtcaacatggccggcaacgtcgacaac
aacagcatcgcgctcaacgccaactggcacggccactgggtcgaagagaccggcatgttc
agctcggacaagcgccacgagacgaacggcgtggccgtcttgggcaacctggcctcgggc
atccaggcgggcaatgcgctgtcggtgacctcgggcggtgcgaccgtcaataccggcaac
ctgctgggcagcacggtggacctgaccagcgccgcgctcgtcaacggcatcaccagcccg
agccagccgacgccgccgtcggtggcggggcagcaggtcatctcgctggcgccgacgccg
gcaccgtcgggctcgctgccgacggccaacaacacgggcaccggcccggccgcgcaagcg
gccagcgcgacgccgaccacgtccagcgcctccggcggcgcaccgcaggcgagcgtgacg
ccggtgcaaacgccggcctggcgcttccagcccgcgatcgtgacaacgccgagcgcgccg
ggcagcacgcaggtcagctggcacttcaacgcgccggcggccggcagtgcagtgagcgca
ttcgcgtccaccgtcagcagcacgacctacgtgaacccgaacccggcgacggccgtgctg
gccggcgtcacgcccgacagcctgctgtcgcagctgccggccgacctgcgcccgggcggc
acgccgttctactacgacccgttcaccgaaaaccagaagctgcagcaggccgcgctggcg
cagaccgggcagagcagcttcgtcaacggcctgagctacgacagccagaaccggctctcc
gtcacggaccaggaaaagctgatcctgtaccggaacgcggccgactacgccaaagcgcac
aacatcccgctgggccaggcgctgccgcagcagcagatcgcgcagctggacaagccgatg
ctgtggtacgtgacgcagcaggtgccggacccgaactgcaacacggtggcgagcacggcg
tgcccgatggtgagtgcgctggtgccgcagctgtatctgccggccggctacgcggacgcg
atcacgcagcccgcgggcggcatgatcgccggcaccaacgtcaacgtgaacgtcgacggc
acgctgcgcaacagcgggcagatcgtcgcgggcgatgcgctcaacgtgcacgcgggcacc
atcgacgcgcggccgaacgtggtgaacgtcggcacgtcggcgtacaaggtggagggcggc
tggctggaggtgagcggcacgcaggtgcagccgggcgggtttatgagtgcggtgaatctg
aacgttaccgccaatgcgatcaacgcggtcaacgatgcgttcgctgtgcgcaacgcggat
ggctcgatcgaccaggccaagaccgatgcgctgattgcgcaactgaaggccaatcttggc
gggaactacaccgccgggacggtcaaggatgacatccaccagaatttcatcaaggaacag
agtgcactgccgacgttcgtggtgatggtgattgcgctggtcgccgccgttgtgacggcg
ggcgccgctgcagcagccatcgccgccgcagaggtcgcggcagccgaagcgggcatggcg
actttgattgcaacgggctcggttgaagccgcgacggcagcaggcggcattatggccagc
tcggtctttgccgctggcggcatagcgaacttggcaattgctggcgcgttgggcgggatg
gccgcgagtgtggtttcgcaggttggcctgacgggccggctcagcgtgggccagacgctg
atcgctggtgccgcaggggcgatcaccggcgggatgacgggatattttggggcgaactac
ggcattgatcgcttactcgcgtcgaccgcggcaggatgcggtacggcggcgatgtctggc
ggcgattgcaagtcaggagcaatttccgggttcgcaacagcagccatcgcttgggcgggg
gatgcgatgcggcagaatcaaattgagtcgtcgaagcggtttagtggcatcaccgacacg
aaagcctctgagttgggtccggtggataacgctagcggtccaagtgcaggtgtgaacggt
gacggttacaagattgcgggaacgcgcgtcagtttcgatgatttgcggaaatatggcgac
gtgcagcaagcagctgacggctcttggacttttacggggacacaagttgaccccaagact
ggaacattttggactctgagagatgccctgcaaaaggaaggaggtttgaccggcggcgct
cagggtcttagcgggaccctgagtggggctccgtacgcacccggaacagccacagataag
cttctcgaaagttttgccgggcctcatgatttcatgggcagcatttttgcctatgacaag
ttggggaatctgaagcaggggatgactgctctccagagaactctatttgaaatccagacg
gatattgatattccgttgtcggctccttttgcaggggtgacattcttgaatcaatatggg
gtagattggtcgaccttccggaaccagtttaaccagacaaaggacaagcgatga
DBGET
integrated database retrieval system