Agrobacterium pusense CFBP5875: CFBP5875_00105
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Entry
CFBP5875_00105 CDS
T06598
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFBP5875_00105 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_00105 (mutS)
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFBP5875_00105 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
QCL85597
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Position
circular:19249..21900
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AA seq
883 aa
AA seq
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MMEQYIEIKANNPGSLLFYRMGDFYELFFDDAVEASRALGITLTKRGQHMGHDIPMCGVP
VHAADDYLQKLIMRGYRVAVCEQVEDPAEAKKRGSKSVVKRDVVRLVTPGTLTEEKLLSP
TESNYLMALARIRGSAEAQFALAWIDISTGVFRLAETTLTRLLADIWRIDPRELIVADSL
FHDEELRPVFDMLGRVAVPQPAILFDSATAEGRIARYFNVSTLDGFGTFSRVEMAAAAAA
VAYVEKTQIAERPPLGAPERESAASTLFIDPATRANLELVKTLSGERDGSLLHALNRTVT
GGGARLLAERLMSPLTDPERINARLDAVAYLIDDVSLCDDLRDALKQVADMPRALSRLAL
ERGGPRDLGAIRQGLASAERIAAILDQGLLPEELASALADLKALPSGLEAMLGSMLADDL
PLLKRDGGFLREGANPELDEVRALRDQSRRVIAGLQLQYAEETGIKSLKIKHNNVLGYFI
EVTAGNADVMTATDEAKARFIHRQTMAGAMRFTTTELADLESRIANAAAEALTMELEAFE
RMVKAVVQQADAIKAGALALAVIDVASSLAYLATEQAYCRPIVDASMTFSIKGGRHPVVE
QALRRQSAGPFIANNCDLSAVNGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQIGSFV
PAEAAHIGVVDRLFSRVGASDDLARGRSTFMVEMVETAAILNQATDRSLVILDEIGRGTA
TFDGLSIAWASVEHLHEVNRCRGLFATHFHELTVLSEKLGRLSNATMRVKEWEGDVIFLH
EVGPGAADRSYGIQVARLAGLPASVVERAREVLTKLEDADRKNPASQLIDDLPLFQIAVR
REETRKAGPSKVEEALKSFNPDEMTPREALDALYALKKELGKA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcaatatatcgaaatcaaggcgaacaatcccggttcgctgctgttctaccgc
atgggcgatttttacgaattgttctttgacgatgcggtggaagcttcccgcgctctcggt
atcacgctgacgaaacgtggccaacacatgggtcacgatattcccatgtgcggcgttccc
gtccatgctgcggatgattatctccagaagctcatcatgcgcggctatcgcgttgccgtc
tgcgagcaggtcgaagacccggccgaggcgaagaagcgcggatcgaaatccgtggtaaaa
cgcgatgtggtgcggcttgtcacgcctggcacgctcaccgaagaaaagctgctctcgcca
acggaatccaactatctgatggcgcttgctcgtattcgcggcagtgcggaggcacagttc
gcgcttgcctggattgatatttccaccggcgtcttccgtctggcggaaacgacgctgacg
cggcttcttgccgatatctggcgtatcgacccgcgcgagctgatcgttgccgacagcctg
ttccacgacgaggaattgcggccggtgttcgatatgctgggccgcgtggcggtgccgcag
ccggccattctgttcgacagcgctacggctgaagggcggatcgcgcgttacttcaacgtc
tcgacgctcgatggtttcggcacgttttcgcgcgtggaaatggccgctgccgctgccgcc
gttgcctatgtcgaaaaaacgcagatcgccgagcgcccgccgctcggcgcgccggaacgc
gaaagcgctgcctcgacgttgttcatcgatcccgccacccgagccaatctggaactggta
aagacgctctcgggtgagagggacggctcgttgctgcatgcgctgaaccgaacggtcacc
ggcggtggtgcgcggcttctcgccgagcggctgatgtcacccttgaccgatccggagagg
atcaacgcccgtctcgacgcggttgcttatttgattgacgacgtctccctctgcgacgat
ctgcgcgatgcgctgaagcaggtggccgacatgccgcgcgcgctttcccgccttgcgctg
gagcgcggcggcccgcgcgatctcggcgcgatccggcagggcttggcgtcggccgagaga
attgccgccattctcgatcaggggctgttgccggaggagcttgcctcagcccttgcggat
ctgaaagccttgccgagcgggctggaagcgatgctcggctcgatgctggccgacgatctg
ccgcttctgaagcgcgatggcggcttcctgcgtgagggcgccaatcccgaactcgatgag
gtgcgggcgctgcgcgatcagtcgcgtcgggtgatcgccgggctgcagctgcaatatgcc
gaggagaccggcatcaagtcgctcaagatcaagcataacaatgtgcttggctatttcatc
gaggtgacggcgggcaatgccgatgtgatgacggcgaccgacgaggcgaaggcccgcttc
atccaccgccagacgatggccggtgccatgcgtttcaccaccaccgagcttgccgatctc
gaaagccgcatcgccaatgctgctgccgaagccctgaccatggagctggaagccttcgaa
cggatggtaaaggcggtggtgcagcaggccgacgcgatcaaggccggcgcgctggcgcta
gcggtcatcgatgtcgcctcgagcctggcctatctcgcaaccgaacaggcctattgtcgg
ccgatcgtcgacgcctccatgaccttttcgatcaagggtgggcgtcacccggttgtagaa
caggcgctgaggcggcagtcagctgggcccttcatcgccaacaattgcgatctgtcggcg
gtcaatggcggcaagaacggcgcgatctggctgctcaccggtccgaacatgggcggtaaa
tcgaccttcctgcgccagaatgcgctgatcgccatccttgcgcagatcggttccttcgtg
ccggcggaagctgcccatatcggcgttgtggaccggttgttttcgcgtgtcggcgcgtct
gacgatctggcgcgtggccgctcgaccttcatggtggagatggtggaaactgccgccatc
ctcaatcaggcgacggaccgctcgctggtcattctggacgagatcggccgaggcacggcg
accttcgacggactttccatcgcctgggcgtcggtggagcacctgcatgaggtcaatcgc
tgccgtggcctcttcgcgacgcattttcatgagctgacggtgttgtcggaaaaacttggc
cgcctttccaatgccacgatgcgggtgaaggagtgggaaggtgacgtcatcttcctgcac
gaagtcggaccgggcgctgcggatcgttcctatggcattcaggtcgcacggcttgcgggc
ttgccggcttcggtggtggaacgcgcccgcgaggtgctgacgaagctcgaagatgccgac
cgcaagaacccggcaagccagctgattgatgatctcccgctgttccagatcgcggttcgc
cgcgaggaaacccgaaaggcaggaccatcaaaggtggaggaagccctgaaaagcttcaat
ccggacgaaatgacaccgcgtgaggcattggacgcgctctatgcgttgaagaaagaactt
ggcaaggcttga
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