KEGG   Agrobacterium pusense CFBP5875: CFBP5875_00675
Entry
CFBP5875_00675    CDS       T06598                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rpus  Agrobacterium pusense CFBP5875
Brite
KEGG Orthology (KO) [BR:rpus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpus03400]
    CFBP5875_00675
Enzymes [BR:rpus01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CFBP5875_00675
    5.6.2.6  RNA 3'-5' helicase
     CFBP5875_00675
DNA repair and recombination proteins [BR:rpus03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CFBP5875_00675
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: QCL83219
LinkDB
Position
circular:138293..140812
AA seq 839 aa
MKHTESPISGIDVGTLPLSFQKWFVEKGWSPRAHQLELMARARGGENMLLIAPTGAGKTL
GGFMASLTDLTERGKIPPGSGFVGVHTLYISPLKALAVDIERNLTKPVSEMGLPIVIETR
TGDTPQAKRQRQKVRPPDILLTTPEQVSLLLANKEAERFFRDLKYVVLDELHSLVTSKRG
HLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQGQGKPPAGLITVEGGAKPDIS
ILHTEERIPWSGHSARYAGKDLYEALKQHQTTLVFVNTRSQAERVFQELWTINDDNLPIA
LHHGSLDAGQRRRVEAAMAENRLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRANHRMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPIAEGALDVLAQHVLGMAC
AEPFDADELYREVTSASPYADLPRATFDRVVDFTATGGYALRTYERYARIRQMKDGRWRV
SNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVGRGGMSLGKVEEYFLEQLVQGDTFL
FAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKFPLSTYLADQVRSMLADPTRWHALP
DQVRDWLAIQKEKSIIPKRDELLVETFPFRKRFFMVMYPFEGRLAHQTLGMLLTRRLERA
GAKPMGFVATDYSLAIWAMEDIGMRLKSRRLSLADLLDEDMLGDDLEAWLDESFMLKRTF
RNCAVISGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRRDAAAGLLDIG
RLGDMLKRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLAEAADELIAEAMS
NT seq 2520 nt   +upstreamnt  +downstreamnt
gtgaaacacaccgagtcccccatttccggcatagacgtcggcaccttgcccctttcattc
cagaaatggtttgtcgaaaaagggtggtctccgcgcgcccatcagctggagcttatggcg
cgggcacggggcggcgagaacatgttgctgatcgcgcccaccggtgctggcaagacgttg
ggcggcttcatggcctcgctcaccgacctgacagagcggggcaagataccgcctggctcc
ggctttgtcggcgtgcacaccctctacatctcaccgctgaaggcgcttgcagtcgatatc
gagcgtaatctcaccaagcccgtttccgaaatgggtctgccgattgtcatcgaaacccgc
accggcgatacgccccaggcgaaacgccagcgccagaaggtgcgcccaccggatatcctg
ctgaccacaccggaacaggtctcgctgctgctcgccaacaaggaggccgagcgctttttc
cgtgacctgaaatatgtggtgctggatgagctgcattcgctcgtcacctccaaacgcggc
catctgctgtcgctggcgctcgcccgcgtgcgccggcatgcgcccgatgtccgtttcatc
ggcctttcggccacggtggcggagccgatggatttgcgccgttatcttgcaccgcagggg
caggggaagccgcccgccggcttgataaccgtcgaaggcggtgcaaagccggatatttcc
atcttgcacacggaagaacgcatcccatggtccggccattcggcacgttatgccggaaag
gacttatacgaagcgttgaagcagcatcagacgacgctggtgtttgtcaacacacgctcg
caggcggaaagggtctttcaggagctctggacgatcaatgacgacaatttgccgatcgca
ctgcatcacggctcgctggatgccgggcagcgccgcagggtggaagcggccatggcggaa
aacaggttacgtgccgttgttgccacctccaccctcgatctcggcatagactggggtgac
gttgaccttgtcgtgcatgtcggcgcgccgaagggcgctagccgcctcgctcagcgtatc
ggccgtgccaaccaccgcatggatgagccgtcaaaggcgatcctcgttcccgccaaccgc
ttcgaggtgatggaatgcagggcagcgctggatgccaactatatcggcgcgcaggatacg
ccgccgatcgccgaaggcgcgcttgatgttctcgcccagcacgtactcggcatggcctgt
gccgagcctttcgatgcggatgaactttatcgcgaagtcaccagcgcctcgccctatgcc
gacctgccgcgtgccaccttcgatcgggtggtggattttactgccaccggcggctacgcg
ctgcgcacctatgaacgttatgcccgcatccgccagatgaaggacggtcgctggcgcgtg
tccaatccggcggtagcgcagcaatatcgcctcaacctcggcaccatcgtcgaggcggcg
gaactcaatgtccgcatggtcaagcgcaatgccaagggcacggtcggtcgcggtggcatg
tcgctcggcaaggtcgaggaatatttcctagagcagctggtgcagggcgatacttttctc
tttgccggcaaggtgctgcggttcgagggcatcagggagaatgaatgcctggtctcacag
gccttttccatggatccgaagataccctcctatgccggtggcaaatttccgctttccacc
tacctggcagatcaagtgcgctccatgctggcagacccgacacggtggcatgccctgccg
gatcaggttcgcgactggctggcaatccagaaggagaagtcgatcattcccaagcgcgac
gagctattggtggagaccttccccttccgtaagcgcttcttcatggtcatgtatcccttc
gagggacggctggcgcatcagacgctcggcatgcttctgacgcggcggctggagcgggcc
ggggcaaaaccgatgggtttcgtcgccaccgattattcgctggccatctgggccatggag
gatatcggcatgcggctgaagtctcgccgcctgtcgctggccgaccttctcgatgaggac
atgcttggcgacgatctggaagcatggcttgacgaatccttcatgctgaaacgcaccttc
cgcaattgcgcagtcatttccgggctgatcgaacgccgccatcccggcaaggaaaagacc
ggccggcaggtcacggtgtccgccgatcttatttatgacgttcttcgcagccatgagccg
gatcatatcctgctggaagcgacgcgacgggatgccgcagcaggacttttggatattggc
cgtcttggcgatatgctgaagcgaatcaagggacacaccacgcatcgcgcgctggagcac
gtctcgcccctcgccgttccggtcatgctggaaatcggcagggagacggtggcgggcgaa
gcgatggacgatgtgctggcggaagccgctgatgagctgatcgccgaggccatgtcctga

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