Agrobacterium pusense CFBP5875: CFBP5875_01940
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Entry
CFBP5875_01940 CDS
T06598
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFBP5875_01940 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpus03019
]
CFBP5875_01940 (groL)
03110 Chaperones and folding catalysts [BR:
rpus03110
]
CFBP5875_01940 (groL)
03029 Mitochondrial biogenesis [BR:
rpus03029
]
CFBP5875_01940 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpus04147
]
CFBP5875_01940 (groL)
Enzymes [BR:
rpus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CFBP5875_01940 (groL)
Messenger RNA biogenesis [BR:
rpus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFBP5875_01940 (groL)
Chaperones and folding catalysts [BR:
rpus03110
]
Heat shock proteins
HSP60 / Chaperonin
CFBP5875_01940 (groL)
Mitochondrial biogenesis [BR:
rpus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CFBP5875_01940 (groL)
Exosome [BR:
rpus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CFBP5875_01940 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CFBP5875_01940 (groL)
Exosomal proteins of breast cancer cells
CFBP5875_01940 (groL)
Exosomal proteins of colorectal cancer cells
CFBP5875_01940 (groL)
Exosomal proteins of bladder cancer cells
CFBP5875_01940 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCL83442
LinkDB
All DBs
Position
circular:complement(391212..392846)
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKEVKFGRTAREKMLKGVDVLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQLVREVASKTNDIAGDGTTTATVLAQAIVREGSKAVAAGMNPMDLKRGI
DLAVAEVVKDLQAKAKKINTSEEVAQVGTISANGERQIGLDIAEAMQKVGNEGVITVEEA
KTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYILLHEKKLSNLQAMLPVLEAV
VQTGKPLVIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEDLGIKLENVTLDMLGKSKKVSISKENTTIVDGAGQKSDIEGRVAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRIDDALNATRAAVQEGIVPGGGVALL
RSSTKIAVKGENDDQEAGINIIRRALQALVRQIADNAGDEASIVVGKILEKNEDNYGYNA
QTGEYGDLIQLGIVDPVKVVRTALQNAASVASLLITTEAMIAELPKKDAPMPAMPGGGMG
GMDF
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaagtaaaattcggccgcacagcacgcgaaaagatgctcaagggcgtc
gacgttcttgctgatgcagtgaaggtaaccctcggcccgaagggtcgtaacgtcgttatc
gacaagtccttcggcgctccgcgcatcaccaaggacggcgtttcggtcgccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcacagctcgttcgcgaagttgcctccaag
accaacgacatcgccggtgacggcaccaccacagcgaccgttctggcccaggccatcgtt
cgcgaaggttccaaggcagtcgctgccggcatgaacccgatggacctgaagcgcggtatc
gatctggccgttgctgaagtcgtcaaggaccttcaggccaaggccaagaagatcaacacc
tctgaagaagttgcgcaggtcggcacgatctccgcaaacggcgaacgtcagatcggtctc
gacattgctgaagcaatgcagaaggtcggcaacgaaggcgtcatcaccgttgaagaagcc
aagaccgctgaaaccgaactcgaagtcgtcgaaggcatgcagttcgaccgcggctacctg
tcgccctacttcgtgaccaacccggaaaagatggtggctgacctcgaagacgcctacatc
ctcctgcacgaaaagaagctctcgaacctccaggccatgctgccggttctcgaagctgtc
gttcagaccggcaagccgctcgtcatcatcgctgaagacgtcgaaggcgaagctcttgca
acgctcgtcgtcaacaagctgcgtggcggcctcaagatcgctgccgtcaaggctcctggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggtggtaccgtc
atttccgaagacctcggcatcaagctcgaaaacgttacgctcgacatgctcggcaagtcg
aagaaggtttcgatctccaaggaaaacaccacgatcgttgacggcgccggccagaagtcc
gacatcgaaggtcgcgttgcccagatcaaggcccagatcgaagaaaccacctccgactac
gaccgcgaaaagctgcaggaacgccttgccaagctcgctggcggcgttgccgttatccgc
gttggcggttcgacggaagtcgaagtgaaggaaaagaaggaccgcatcgacgacgctctc
aacgcgacgcgcgctgctgttcaggaaggcatcgtgcctggtggtggcgtggctctgctg
cgttcgtccacgaagatcgccgtcaagggcgaaaacgacgaccaggaagctggtatcaac
atcatccgccgcgccctgcaggctctggttcgccagattgcagacaacgctggtgacgaa
gcttcgatcgttgttggcaagatcctcgagaagaacgaagacaactacggctacaacgcc
cagaccggcgaatatggcgacctgatccagctcggcatcgtcgacccggtcaaggttgtc
cgcacggctctgcagaacgcagcttcggttgcttcgctgctgatcaccaccgaagccatg
atcgccgagcttccgaagaaggacgctccgatgccggcaatgccaggcggcggcatgggc
ggcatggacttctaa
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