Agrobacterium pusense CFBP5875: CFBP5875_03535
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Entry
CFBP5875_03535 CDS
T06598
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03420
Nucleotide excision repair
rpus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFBP5875_03535
03430 Mismatch repair
CFBP5875_03535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_03535
Enzymes [BR:
rpus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP5875_03535
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5875_03535
MMR (mismatch excision repair)
Other MMR factors
CFBP5875_03535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
AAA_22
AAA_16
Plant_NMP1
T2SSE
HODM_asu-like
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QCL83714
LinkDB
All DBs
Position
circular:689179..691056
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AA seq
625 aa
AA seq
DB search
MTSRLGKPDTQADVDLKELLDQRPPENFVVVAGAGSGKTTSLIKALSHLTRTRGRELLMR
GQQVACITYTDVAVTEIRGDVGDDALCHVSTIHSFLWSLIQPFQTDIRDWVITRIGEKIL
EESARLDNPRTRAASRPKIEASLVRYNHQKEIVAGLERFTYGTGSDYSHGILGHSDILKL
VPALLQEKQLLRDLLAARYPVLFVDESQDTTPAFIEALRMVARTVGHDFCLGFFGDPMQK
IYTAGAGAIALEEGWRELKKPENFRCPQSVLRVINNIRAEDDRLEQIRGRTIRQDGRDVP
VEGTARLFLLPADGKRTERVGQVRRYLSRNNDDPLWESDAEAADVRMLVVVHRMAASRLG
FPDLYAALNDDAPESLKDGVVDGTAWPLRPFMTYLLPLAAAVRAEDDFEVVAVLRDRGPL
SNPAGLQDVANILVGLQAATIELNRLLSNPATTVRQVITFAIAATLMVADERLSRHLAVP
AAPQDEMDPERPALAAFLESPAIQLWEYKKYIEDLSPFATQQGVKGAEFDRVMVLLDDEE
GRGQTLFSYGKYFGITELSPTDKANIADGKDSVVSRTRRLFYVCCSRAVQDLAVVLFVPD
VSAARDAVAAKGFFAMENIIGEDAL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaccagccggttaggtaagcccgatacacaagccgatgtcgatctgaaagagctgctt
gaccagcgtccgccggaaaactttgtcgtcgtggctggagcaggttctggcaaaacaacg
tccttgatcaaggcgctttcccacctcacgcggacacgagggcgggagctgctgatgcga
gggcagcaggtcgcgtgcatcacgtatacggacgtagccgtgaccgagatacggggcgat
gtaggcgatgacgccctgtgccatgtctccaccatccatagcttcctctggtccttgatc
caacctttccagacagacatccgggattgggtgatcacccgcattggcgagaaaattctg
gaggaatctgcgcggctcgacaatcccaggacaagagcggcgtcacggcccaagatcgaa
gcatcgctggtcaggtacaaccaccaaaaggaaatcgtggccgggctcgaaaggttcacc
tatggaaccggcagtgactactcgcacgggattctggggcattccgatattctgaagctg
gtgccagcgctgcttcaggagaagcagcttctgcgggatctccttgcagcccggtatccg
gtcctgttcgtggacgaaagccaggataccaccccggctttcatcgaagcgcttcgcatg
gtggctaggactgtaggtcatgacttctgcctgggcttcttcggggaccccatgcagaag
atctacaccgccggcgcgggagctatcgcccttgaggaaggctggcgtgagttgaagaag
cctgagaatttccggtgcccgcagagtgttctgagggttatcaataacatccgagccgaa
gacgatcgattggaacagatacggggccgcacaatacgtcaggatggacgagatgtaccc
gtcgagggaactgctagattattcctactgccggctgacgggaagcggacggaacgtgtg
ggccaagtgcgacgatatttaagccggaacaatgacgacccgctctgggagagtgatgcc
gaggctgcagacgtccgaatgctcgtcgtcgttcatcggatggctgcctcgcggcttgga
ttcccagatctatacgcagctctcaacgacgacgcccccgagagccttaaagacggcgtc
gtcgatggcaccgcctggccccttcgaccgttcatgacgtaccttcttccgctggcggct
gccgttcgggctgaagacgatttcgaagtggtggcggttcttcgcgatcgaggtccgctt
tccaatccggccggccttcaggacgtcgcaaatattttggtggggcttcaggcggcgacg
atcgaactcaacaggcttctttcaaatcctgcgaccactgtgaggcaggtgatcacgttc
gcgatcgcggccacattgatggtcgcagatgaaagactgtcacggcatctcgccgttccc
gcagcaccgcaggatgagatggacccggagcggccggcacttgctgcattccttgaaagt
cctgcgatacagctttgggaatacaagaaatatatcgaggacttgtcaccgtttgcgacg
cagcagggcgtcaaaggagcagagttcgatagggtcatggtgctgttggatgacgaagaa
ggcagaggccagaccttgttttcctatggcaagtactttggtatcacggagctatcgcca
acggacaaggcgaacatcgccgatgggaaggactcggtcgtcagtcgaacacggcgcctg
ttctatgtctgctgctcccgcgcggttcaggacctggcggtcgttctgttcgttccggat
gtctcggctgcacgcgatgcggtcgctgctaaaggcttttttgccatggagaacatcatc
ggcgaagacgccctatga
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