Agrobacterium pusense CFBP5875: CFBP5875_04800
Help
Entry
CFBP5875_04800 CDS
T06598
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus00260
Glycine, serine and threonine metabolism
rpus00460
Cyanoamino acid metabolism
rpus00630
Glyoxylate and dicarboxylate metabolism
rpus00670
One carbon pool by folate
rpus00680
Methane metabolism
rpus01100
Metabolic pathways
rpus01110
Biosynthesis of secondary metabolites
rpus01120
Microbial metabolism in diverse environments
rpus01200
Carbon metabolism
rpus01230
Biosynthesis of amino acids
rpus01240
Biosynthesis of cofactors
rpus04981
Folate transport and metabolism
Module
rpus_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CFBP5875_04800
09102 Energy metabolism
00680 Methane metabolism
CFBP5875_04800
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFBP5875_04800
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CFBP5875_04800
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CFBP5875_04800
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CFBP5875_04800
Enzymes [BR:
rpus01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CFBP5875_04800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QCL83936
LinkDB
All DBs
Position
circular:941729..943018
Genome browser
AA seq
429 aa
AA seq
DB search
MSNTDAFFSSPLADVDPEIFGAIEKELGRQRHEIELIASENIVSRAVLEAQGSIMTNKYA
EGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFANVQPNSGSQMNQAVFLALLQPGDTF
MGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVERKAKEHKPKLILAGGT
AYSRVWDWKRFREIADEVGAYLMVDMAHIAGLVAGDQHPSPFPHCHVATTTTHKSLRGPR
GGMILTNDEDLAKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALKPEFKDYAAQVVKNAKA
LAETLVEGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYITCNKNGIPFDPEKPF
VTSGVRLGTPAGTTRGFKEAEFREIGKLIVEVLDGLKVANSDEGNASVEAAVREKVVGLT
DRFPMYPYM
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacacagatgctttcttctccagtccgcttgccgatgtcgatccggaaattttc
ggcgcgatcgagaaggaactgggccgccagcgccacgagatcgaactgattgcctcggaa
aacatcgtttcccgtgccgtgctcgaagcacagggttcgatcatgacgaacaaatatgcg
gaaggttatccgggcaagcgttattacggcggctgccagttcgtcgacattgctgaagaa
ctcgccatcgaacgcgccaagaagctgttcggcgtcaacttcgccaacgttcagccgaat
tccggctcgcagatgaaccaggccgtgttcctcgcgctgctgcagccgggcgacaccttc
atgggtctcgatctgaactcgggaggtcacctgacgcatggttccccggtcaacatgtcc
ggcaagtggttcaacgtcgtgtcctacggtgtgcgcgaaggcgataacctgctcgacatg
gacgaagtggagcgcaaggccaaggaacataagccgaagctcattctcgccggcggcacc
gcctattcgcgcgtctgggactggaagcgcttccgcgaaatcgctgacgaagtcggcgct
tacctcatggtcgacatggcccacatcgccggtctcgtggctggtgaccagcacccgtcg
ccgttcccgcactgccacgtcgcaaccacgacgacgcacaagtccctgcgcggcccgcgt
ggcggcatgatcctcaccaacgacgaggatctggcgaagaagttcaactccgccgtcttc
cccggcctgcagggcggcccgctgatgcacgtcatcgccgccaaggctgttgccttcggt
gaagcgctgaagcccgagttcaaggattatgccgcacaggtcgtgaagaacgccaaggcg
ctggccgaaaccctggttgaaggcggtcttgatgtcgtttccggcggcaccgacaaccac
ctgatgctggtcgaccttcgcaagaagaacgccaccggcaagcgtgcggaggcagcactt
ggtcgcgcctacatcacctgcaacaagaacggcattcccttcgacccggaaaagcccttc
gttacctctggtgtccgtctcggcacgccggccggcacgacgcgcggtttcaaggaagcg
gaattccgcgaaatcggcaagctgatcgttgaggttctcgatggtttgaaggtcgccaat
tcggatgaaggcaatgcctccgtcgaggctgcggtgcgtgaaaaggtcgtcggcctgacg
gaccgtttcccgatgtatccgtacatgtaa
DBGET
integrated database retrieval system