Agrobacterium pusense CFBP5875: CFBP5875_06075
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Entry
CFBP5875_06075 CDS
T06598
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFBP5875_06075 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_06075 (uvrA)
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5875_06075 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFBP5875_06075 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
nSTAND1
AAA_29
DnaJ_CXXCXGXG
AAA_16
RsgA_GTPase
AAA_33
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QCL84163
LinkDB
All DBs
Position
circular:complement(1200384..1203305)
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGIDLDLPRNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAFEEGTRLYILAPIVRGRKGEYKKELAELMKKGFQRV
KVDGQFYEIADVPALDKKYKHDIDVVVDRAVVRPDMAARLADSLETCLKLADGLAIAEFA
DRPLPPEETAAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPS
CDGLGSQQKVDENLIVPEPARTLRDGAIAPWAKSSSPYYNQTLEALGKAFGFKLSSKWSD
LSKEAQHAILQGTDDKIEFNYQDGARSYKTVKNFEGIVPNLERRWKETDSAWAREEIERY
MSAAPCPACAGYRLKPEALAVKINKLHIGEVTEMSIRTARDWFEVLPESLNAKQNEIAVR
ILKEIRERLRFLNDVGLDYLSLSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAEGSPQ
EVMANPKSLTGKYLSGELGVAVPAERRKPKKGREIKVFGARGNNLKNVTAAVPLGVFTAV
TGVSGGGKSTFLIETLYKSAARRVMGAREIPAEHDRIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFAGLPEAKARGYAPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFAAVPAVRDKLQSLFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVNKLLEMLHALV
EQGNSVVVIEHNLEVIKTADWIIDIGPEGGTGGGEVVATGTPEDIVKVERSYTGHFLKEL
LERRPAGKREAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactgaagacgatttccatccgtggtgcccgtgaacacaatctcaagggtatc
gatctcgatctgccacgcaacaagctgatcgtcatgaccgggctttccggctcaggcaag
tcgtcgctcgccttcgatacgatctacgccgaaggccagcgccgttatgtcgaaagcctc
tcggcctatgcgcgccagttcctggaaatgatgcagaagccggatgtcgaccagatcgag
ggcctgtcgccggcaatctccatcgaacagaagaccacctcgcgcaacccgcgctccacg
gtcggcacggtcaccgagatttacgactatatgcgccttctcttcgcgcgtgtcggcgtc
ccctattcgccggccacgggcctgccgattgaaagccagacggtcagccagatggtcgac
cgcatcctcgctttcgaggagggcacgcgtctttacatcctcgcgccgatcgtgcgcggc
cgcaaaggcgagtacaagaaagaacttgccgagctgatgaagaagggcttccagcgtgta
aaagtggacggccagttctacgagatcgccgacgttccggccctcgacaagaagtacaaa
cacgacattgacgtggtggttgaccgcgccgtcgtgcgcccggatatggccgcgcgtctt
gccgacagtcttgagacctgcctcaagcttgccgacgggctggcaattgccgaatttgcc
gacaggcccctgccgcccgaagagacagccgccggtggttccgccaacaagtctctcaat
gagacccatgagcgggtgctgttttcggaaaaattcgcctgccccgtttccggcttcacc
attccggaaatcgaaccgcgtctcttctccttcaacaaccccttcggcgcctgccccagc
tgcgatggccttggctcgcagcagaaggtggatgagaacctgatcgtgccggagccggcc
cgcaccctgcgtgacggggccattgctccctgggcaaaatcatcgtcgccctattacaac
cagacgctggaagcgctcggcaaagccttcggattcaagctttcgagcaagtggtccgat
ctttcgaaggaggcgcagcacgccattcttcagggcactgacgacaagatcgagttcaac
taccaggacggtgcccgctcctacaagacagtcaagaacttcgaaggcatcgtgcccaat
ctggagcggcgctggaaagagacagacagcgcctgggcgcgcgaggaaatcgagcgctac
atgtcggcagccccctgcccggcctgcgccggttaccgcctgaagccggaggcgctagcg
gtcaagatcaacaagctgcatatcggtgaagtcaccgaaatgtcgatccggacggcgcgc
gactggttcgaggtgctgccggaaagcctgaacgcgaagcagaatgaaattgccgtccgt
attctcaaggaaatccgcgaacgcctgcgattcctcaacgatgtagggctggattatctc
agcctgtcgcgcaattcgggcacgctgtcgggcggggagagccagcgtatccgtctggcc
tcgcagatcggctctggcctcaccggcgttctctacgttctcgatgagccctcgatcggc
ctgcaccagcgcgacaatgcgcgcctgctagatacgctcaaacatctgcgcgatatcggc
aacaccgtcatcgtggtcgaacatgatgaggacgccattctgacggcggattatgtggtc
gatatcggcccggcggccggtattcacggcggccaggtgattgccgaaggatccccgcag
gaagtgatggccaatccgaaatcgctgaccggcaaatatctctccggtgaactcggcgtt
gccgtgccggctgagcgccgcaaaccgaagaagggccgcgagatcaaggtttttggcgca
cgcggcaacaacctgaagaatgtcacggccgctgtgccgctcggtgttttcacggccgta
accggggtttcgggtggcggcaaatccaccttcctgatcgagacgctctataagtcggcg
gcgcgccgggtcatgggcgcgcgtgaaatcccggccgaacacgaccgcatcgatggtttc
gaattcatcgacaaggtgatcgatatcgaccagtcgccgatcggacgcacgccgcgttcc
aacccggccacctataccggcgcctttacgccgatccgtgactggttcgccggcctgccg
gaagccaaggctcgtggttacgcgcccggccgcttctccttcaacgtcaagggtggccgc
tgcgaggcctgccagggcgacggggtgatcaagatcgagatgcacttcctgcctgacgtc
tacgtcacctgcgacgtctgccacggcaagcgttataaccgcgagacgctggacgtcacc
ttcaagggcaaatccatcgccgacgtgctggatatgacggttgaggaaggcgtcgaattt
ttcgccgccgttcccgccgtgcgcgacaagctgcaatcgctcttcgatgtcggcctcggt
tacatcaaggtcggacagcaggccaatacgctttcaggcggcgaggcacagcgcgtcaag
ctcgccaaggaactgtcgaagcgctcgacgggccgcacgctctatattctcgacgagccg
acgacgggcctgcatttccacgacgtcaacaagctgctcgaaatgctgcatgcgctggtg
gaacagggcaattccgtggtggtgatcgagcataatctcgaagtcatcaagacggcggac
tggatcatcgatatcgggcctgaaggcggcacgggcggcggcgaagtggtggccacgggc
acgccggaagacatcgtcaaggtggagcgttcctataccggccacttcctgaaggagctt
ctggagcgccggccggccggaaaacgggaggctgcggagtaa
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