Agrobacterium pusense CFBP5875: CFBP5875_08750
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Entry
CFBP5875_08750 CDS
T06598
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03420
Nucleotide excision repair
rpus03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFBP5875_08750
03430 Mismatch repair
CFBP5875_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_08750
Enzymes [BR:
rpus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP5875_08750
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5875_08750
MMR (mismatch excision repair)
Other MMR factors
CFBP5875_08750
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
Peptidase_M13
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QCL84633
LinkDB
All DBs
Position
circular:1709343..1711817
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AA seq
824 aa
AA seq
DB search
MSNSFDDMPFFDEEPVAPRRATNNAPSENGGGLGIAARAMAARDQTRAAPDYLSGLNPEQ
RDAVETLDGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERI
GVLVGGAVEGMPWLGTFHSIGVKLLRRHAELVGLKSDFTILDTDDVVRLIKQLIQAEGLD
DKRWPAKQFAGMIDGWKNKGLTPPDIPEGDSRAFANGKGRELYTAYQNRLKTLNACDFGD
LLMHPISIFRRHTDILKEYHQKFRYILVDEYQDTNTAQYMWLRLLAQRAKGEPQNVCCVG
DDDQSIYGWRGAEVDNILRFDKDFPGAKVIKLERNYRSTEHILGAAGHLIAHNEGRLGKT
LFTERSSPDDEKVVVHAAWDSEEEARAVGEEIEQLQRKGHLLNDMAILVRASFQMREFED
RFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVCQPADDLAFERIVNTPKRGLGDTTIRN
LHDYARARDIPMLAAAADIIETDELKPKARKALFDVVQDFRRWQGLLENTEHTTLAEQIL
DESGYTAMWQADKTAEAPGRLENLKELIRSMEAFESMRGFLEHVALVMDAEQNENLDAVS
IMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEGGRSGLEEERRLAYVGITRAKKLCHIW
FVSNRRIHGLWQSTLPSRFLDELPPAHVDVAASDSNYGGYGGRGGYGQSRFDKADPFANT
YSTPGWKRAQQNRSDATRDNWGTRSGHAVERIGYGESGPRTRTIDGELVAKSVADTPSRF
FVGDRVFHIKFGNGNIAAIEGNKLTIDFDRAGQKRVLDGFVEKV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacagttttgacgatatgccgttcttcgatgaggaacccgtggcaccgcgcagg
gcgacgaacaatgccccttcggaaaacggcggcgggcttggcattgccgcccgcgccatg
gctgcgcgcgatcaaacgcgtgccgcacccgattatctttccggcctcaacccggaacag
cgcgatgccgtggaaacgctggacgggccggttctcgtcctcgccggcgccggcaccggc
aagacccgtgttctgacaacccgcattgcccatattctcgcaacgggccgggcctatccc
agccagatccttgccgtgaccttcaccaacaaggccgcccgcgagatgaaggaacgcatc
ggcgttctcgtcggcggcgcggtcgagggcatgccctggctcggcacgttccactccatc
ggcgtcaagctgttgcgtcgtcacgccgaactcgtcggcctgaagtcggatttcaccatt
ctcgatacggatgacgtggtgcggctgatcaagcagctcatccaggccgaaggtctcgat
gacaagcgctggccggccaaacagttcgccggcatgatcgacggctggaagaacaagggc
ctgacgccgccggatattcctgaaggagacagccgcgccttcgccaatggcaagggccgc
gagctctataccgcctatcagaaccggctgaaaacgctgaatgcctgcgacttcggcgac
cttttgatgcacccgatcagcatcttccgccgccatacggatattctgaaggagtatcac
cagaagttccgttacattctggtggacgaatatcaggacaccaacacggcgcaatatatg
tggctgcggctgcttgcgcagcgcgccaagggcgagccgcaaaacgtctgctgtgtgggt
gacgacgaccagtcgatctatggctggcgcggcgcggaagtggacaacatcctgcgcttc
gacaaggattttcccggcgccaaggtcatcaagctcgaacgcaattaccgctccaccgag
catattctcggcgcggctggccacctcatcgcgcataatgagggacgcctcggcaagacg
ctgtttaccgagcgtagcagccctgacgacgaaaaggtcgtagtgcatgcggcctgggat
tccgaggaggaagcccgcgcagtcggcgaagagatcgagcagcttcagcgcaagggtcac
ctgctgaacgacatggcgatcctcgtccgcgcctccttccagatgcgcgaattcgaagac
cgttttgtcacgctcggtctcaattaccgcgtcatcggcggcccgcgcttttatgagcgc
ctcgaaatccgcgatgccatggcctatttccgcctcgtctgccagccggccgacgatctc
gccttcgagcggatcgtcaatacgcccaagcgcggccttggcgatacgacgatccgcaac
ctgcacgactatgcgcgtgcccgcgacattccgatgctggcggcggcggccgacatcatc
gaaaccgacgagctgaaaccgaaggcccgcaaggcgctgttcgatgtggtgcaggatttc
cgccgctggcagggtctactcgaaaacaccgagcacaccacgcttgccgagcagattctc
gacgaaagcggctacaccgccatgtggcaggccgacaagacggccgaagcgcccggacgc
cttgagaacctgaaggaactcatccgctcgatggaagcctttgaaagcatgcgcggtttc
ctcgagcatgtcgccctcgtcatggatgccgagcagaacgaaaatctcgatgccgtctcc
atcatgacgctgcattccgccaagggtctggaattcgacaccgtcttcctgcccggctgg
gaagaaggcctgtttccgcaccagcgggcgctggatgaaggcggccgctccggtctggag
gaagaacgtcgtcttgcctatgtcggcattacgcgtgccaagaaactctgccatatctgg
ttcgtctcgaaccgccgtattcacgggctgtggcaatccaccctgccctcgcgctttctg
gatgaactgccgcccgcccatgtggatgtggcagcgtccgacagcaattacggcggttat
ggcgggcgtggcggctatggtcagtcgcgtttcgacaaggcagatccctttgcgaacacc
tattcaaccccgggctggaagcgtgcgcagcagaaccgtagcgatgccacccgcgacaac
tggggcacgcgctccggccatgcggtggaacgaatcggttatggcgaaagcggcccgcgc
acccgcaccatcgatggggaactggtggccaaatccgtggccgacacgccgtcaagattc
ttcgtcggcgaccgcgtcttccacatcaagttcggcaacggcaatatcgctgccatcgag
gggaacaagctcaccatcgacttcgaccgcgccggccagaagcgcgttttggatggattt
gtggaaaaggtttga
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