Agrobacterium pusense CFBP5875: CFBP5875_10590
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Entry
CFBP5875_10590 CDS
T06598
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
rpus
Agrobacterium pusense CFBP5875
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpus03021
]
CFBP5875_10590 (rpoH)
Transcription machinery [BR:
rpus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFBP5875_10590 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QCL84955
LinkDB
All DBs
Position
circular:2088330..2089232
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AA seq
300 aa
AA seq
DB search
MARNSLPTITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPERGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRIQAIDDGDLKPEHVKEIATKLQVSEEEVISMNRRL
HGDASLNAPIKASEGESGQWQDWLVDDHDSQEDVLIEQDELETRRRMLAKAMGVLNDRER
RIFEARRLAEEPVTLEELSSEFDISRERVRQIEVRAFEKVQEAVQKEALEAARALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgcctacgattacagccggcgaagccggtctcaatagatatctc
gacgaaatccgcaaattcccgatgctggagccgcaggaagagtacatgcttggcaagcgt
tatgccgagcatggcgatcgcgacgccgcgcacaagctcgtcaccagccatctgcgtctc
gtggccaagatcgccatgggctatcgtggttacggcctgccgatcggcgaagtcgtttcc
gaaggcaatgtcggcctgatgcaggcggtgaagaaattcgatccggaacgcggtttccgt
ctggccacctatgcaatgtggtggatcaaggcctcgatccaggaatatatcctgcgctcg
tggtcgctggtgaagatgggcacaactgccaaccagaagcgtctgttcttcaacctgcgc
cgtctgaagggccgcatccaggccatcgacgatggcgacctgaagccggagcatgtcaag
gaaatcgcgacgaagctgcaggtgtcggaagaagaagtcatctcgatgaaccgccgcctg
catggcgacgcatcgctgaatgcgccgatcaaggcgtccgaaggcgagtccggccaatgg
caggactggctggtggacgaccatgacagccaggaagacgtgctgatcgagcaggacgaa
ctggaaacccgccgccgcatgctggcgaaagccatgggcgtgctgaacgaccgcgaacgc
cgcatcttcgaggcccgcagacttgccgaggagccggtgacgctggaagaactctcctca
gagttcgacatcagccgcgagcgcgttcgccagatcgaagtccgcgcctttgagaaggtg
caggaagcggtgcagaaggaagcgctggaagcggcgcgcgccctgcgcgtggtggatgcg
taa
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