Agrobacterium pusense CFBP5875: CFBP5875_12060
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Entry
CFBP5875_12060 CDS
T06598
Name
(GenBank) LuxR family transcriptional regulator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus02020
Two-component system
rpus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CFBP5875_12060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5875_12060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpus03000
]
CFBP5875_12060
Transcription factors [BR:
rpus03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CFBP5875_12060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QCL85220
LinkDB
All DBs
Position
circular:complement(2399813..2400550)
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AA seq
245 aa
AA seq
DB search
MHDILHFISACYQAGNAERVRSEFATLIREYGFEYFLVSRRMTGELASTGQILAQHLPEG
WIEVYRAKKYNLVDPVRKVIGMVHKPFHWKEALEGLPRAMHRKRASVFFHDAGRYGLQGG
YAFPVHGRAGFIGAVFIGGQDRQLPSLQVELLDAATRAVFWRLLDLSGQAHDLSNIPDGS
ALELTRRETEVLALMADGMTSAEIGRKLSISNHTVDWYINGIQRRFSAKNRQHTVALAFR
HGLLS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatattcttcacttcatctctgcgtgttaccaggcgggaaacgccgaacgtgtg
cgttcagaatttgcaacgctcattcgggaatatggtttcgaatatttccttgtcagcaga
cgcatgaccggcgagctggcctccaccggccaaatccttgcgcaacatttgccggaaggc
tggatagaggtttacagggccaagaaatacaacctcgtcgatcccgtccgcaaagtgatc
ggcatggtgcacaaaccctttcattggaaagaggcgctggaggggcttccccgcgccatg
catcggaaaagggcgagcgtgtttttccacgatgccggccgttacggcttgcagggcggt
tatgcttttcccgtgcatggacgggcgggattcataggtgccgtgttcataggtggacag
gaccggcaattgccctccttgcaggtggaactgctcgacgcggcgacccgcgcggtcttc
tggcgcctgctcgatctctcaggtcaggcccatgatctcagcaatattccagacggttcc
gctcttgagctcacacggcgtgagacggaagtgctggcgctgatggcggatggcatgaca
tcggcggagatcggccgcaagctatccatctccaaccatacggtcgactggtatataaac
gggattcagcgtcgtttcagcgccaagaaccggcagcacaccgtcgcactcgcgttccgc
catggcttgctgagctag
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