Agrobacterium pusense CFBP5875: CFBP5875_12710
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Entry
CFBP5875_12710 CDS
T06598
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rpus
Agrobacterium pusense CFBP5875
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_12710 (addB)
Enzymes [BR:
rpus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP5875_12710 (addB)
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CFBP5875_12710 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QCL85335
LinkDB
All DBs
Position
circular:complement(2549241..2552426)
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AA seq
1061 aa
AA seq
DB search
MTGSHHAKRVLTIAAGTPFLKTLAETLCDGRLAAGYRYDPADPLSLAKVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFDVENPEVLDLAPPISGTGRLIELARLI
LAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALAEVIDAMDTEEKDWEALQHLDTGD
HAQWWQLTADFLKIASIFWPARLAELNRSSAGRHRNAILRAEANRIATLPDTGPIIVAGS
TGSIPAAADLIAAVAALPQGVVVLPGLDLAMPEEQWQAIAEDPTDPSSRTHSQYGLYVLL
QKLGILRDDVAPIGALDSDLEKRAAVFSAALAPAKSTSDWNRWREDRDSAIFYDAFAAAT
LIEAANEREEATAIAVALRLALEAPASGRPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATAQAGLTQLALEAILRPGDPVPIISLLKHPLARFGLSSEAFTGASKALELIAL
RGGRVETEVGNLETVLDTQLLAQREDRHPPAWRLALPDGSVDAARDLARRIAMATEPLRS
AFVRRDRSGRAFTDRLPLSDWAERTGRVMEAICGDENTDLAALWSGETGDKLSSLFAELM
ESGDILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVIIGGLNEG
LWPGQTANNPFLSRTMKTAIGLEPPERRIGQLAHDFEMANGTRHIFYTRALRQGSTPAVA
SRWLQRLLALGGEDFAKVLKKRGETYRHWAGLMDESIEQEAAKRPSPKPPAELQPTRYSF
SEVGRLRRDPYSIYARRILKLDALDPFNRDPNAADRGTLYHTIIERYSREGHIPGTSASL
SAMQRILDECFDAENLPPHVDVIWRPRFAAVARAFIDWEKERHPSIRHSFFEARAGQEIV
EAGIRLTGVADRIDIKTNGQADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFREA
GSPTPENLIYVRLRPGERFFGDQVNNEHSSRSGKRPPKSAIELATESIGQLTKFVHSLRN
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctcccaccacgcaaagcgcgttctgacgatcgccgcgggaacaccgttcctc
aaaacgcttgcggaaacgctgtgcgacggaagactggcggcaggctatcgatatgacccg
gccgatcccctgtcgcttgccaaggtgacgatatatgtgccgacgcggcgttcggcccgc
gtgctgcgctcggaattcgtcgatcttcttggcggccgttccgccattctgccgctcatc
cggccccttggcgaaacggatgacgacagcggtttcttcgatgtcgaaaaccctgaagta
ttggatctcgcgccgccgatttccggcaccggccgactgatcgaactcgcgcgtctcatc
cttgcatggcgcaacagcctgccggacgccatccgggcgatccattccgattcgccgctg
gtcgcccccgccagcccggccgacgcgatatggctcgcgcgtgcgctggcagaggtgatc
gacgcgatggatacggaagaaaaagattgggaagcgcttcagcatctcgataccggtgat
cacgctcaatggtggcagctcacggccgattttctaaagatcgccagcatcttctggccc
gcccggcttgccgaactcaacagatcttcggccggacggcaccgaaacgccatcctccgg
gcagaagcgaaccgaattgccacattgccggacaccggtccgatcatcgtcgctggctcg
acaggctccattcccgccgccgccgatctcatcgccgccgttgcagctttaccgcaaggc
gtggtggtgcttccggggcttgatcttgccatgccggaagagcaatggcaggcgatagcc
gaggaccccaccgatccttcgagccgcactcactcgcaatacgggctttatgtcctgctg
cagaaactgggcatcctgcgtgacgatgtggctccgatcggtgcccttgatagcgatctg
gaaaagcgcgccgcggtgttttcggcagcgcttgcgccggccaaatccaccagtgactgg
aatcgatggcgtgaagaccgggattccgcaattttttacgatgcctttgcagcggccacg
ctgattgaagctgccaacgaacgcgaagaggccaccgccatcgcagtggcgctcaggctt
gcgctcgaagcaccagcctcgggacggccttcgcaggcggccctgataacacccgaccgc
gggctggcgcggcgcgtggcaacggagttgcaacgcttcggcattgaagccgacgattcc
gccggcacgccgctttcggcaacggcccaggccggcctcacgcaactcgcgctcgaggcg
atcctgagacccggagacccggtgccgatcatttcccttctgaaacacccgctcgcccgt
ttcgggctctcgagcgaagctttcaccggagcttcgaaggcgcttgagctgattgcgctg
cgaggcggccgcgtcgaaactgaagtgggcaatctggaaacggttcttgacacccaactc
cttgcgcaacgcgaggacagacatccgcccgcctggcggctggctctgcccgacggaagc
gttgacgccgcacgcgatctggcgcgacggattgcaatggccacagagccgctgcgctcc
gccttcgtccgccgcgaccgatctggccgggcctttaccgacaggttgcctctttccgac
tgggcggaacggaccggccgcgtgatggaagccatctgtggggatgaaaatacagatctt
gccgctctctggtccggcgagaccggagacaagctttccagcctctttgccgaactgatg
gaaagcggagatattctcgacgcggacggtccgcaatggatcgatatattcgcggcgctt
gtggcaggggaatcaatcaagccaagatcgatgcgccatccgcgcatcttcatcttcggc
gcgctggaagcgcggctgcaaagtgtcgatacggtcatcatcggcggtctcaatgaaggc
ctctggccgggccaaacggcgaataatccgtttctttcccgcaccatgaagactgcgatc
gggctggagccgccggaacggcgtatcggccagctcgcgcatgactttgagatggccaac
ggcacgcgacacattttctacacccgggcgctcaggcagggctccacgcctgccgtcgcc
tcacgctggctgcaaaggctgctggccttgggcggcgaggattttgccaaggtccttaaa
aaacgtggcgagacgtatcgtcattgggcgggtctgatggacgagagcatcgagcaggag
gcggcaaagcgcccttccccgaaaccgccggctgaattgcagccgacgcgttactccttc
agcgaagtgggccgcctgcgccgcgacccctattcgatctatgcgcggcgcattctgaag
ctcgacgcgcttgacccgttcaaccgcgacccgaacgcagccgatcgtggcacgctctac
cacacgatcatcgagcgctattcccgtgaggggcacattcccggtacgtcggcctcgctt
tcggccatgcagcgcattctcgacgaatgtttcgatgctgaaaacctgcctccccatgtg
gatgtgatctggcgaccacgttttgcagcggtggcgcgcgccttcatcgactgggaaaaa
gaacgtcatccatccattcgtcacagctttttcgaggcgcgcgcgggccaggaaatcgtc
gaagcaggcataaggctcaccggcgtcgccgaccgcatcgacatcaagacaaacggtcag
gcggatattatcgactacaagacggggctcgcgccttccgtcaaccaggcgcgggcgctg
cttgatccacagcttgcgctggaggcggcggccttgatgcgcggcgccttccgcgaagcc
ggttcgcccacgcctgaaaacctcatctatgttcgcctgcggccgggcgagcgttttttc
ggcgatcaggtcaataacgaacattccagccgaagcgggaaaagaccgccaaaatcggca
attgagctcgcgacggaatcgataggacagctcaccaaattcgttcattcgctgcgcaac
ggggaaaacggcttcgcctcgcggctggtgccggaagaacagcaatcctacggcggggaa
tatgatcacctcgcccgcgtttcggaatggtcgacggcagaaccgggagacggcgatgac
gattga
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