Agrobacterium pusense CFBP5875: CFBP5875_12995
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Entry
CFBP5875_12995 CDS
T06598
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFBP5875_12995 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpus03019
]
CFBP5875_12995 (pnp)
03016 Transfer RNA biogenesis [BR:
rpus03016
]
CFBP5875_12995 (pnp)
Enzymes [BR:
rpus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFBP5875_12995 (pnp)
Messenger RNA biogenesis [BR:
rpus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFBP5875_12995 (pnp)
Transfer RNA biogenesis [BR:
rpus03016
]
Prokaryotic type
tRNA degradation factors
CFBP5875_12995 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QCL85381
LinkDB
All DBs
Position
circular:complement(2609686..2611833)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNQHSVEIEWAGRPLKLETGKVARQADGAVIATYGETMVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQH
DLENNPDILSMIATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVA
GTQDAVLMVESEAKELNEDVMLGAVMFGHRGFQPVIDAIIKLAEVAAKEPREFEPEDFSA
LENEMLALAEAELRDAYKITEKAARYAAVDAVKAKVKAHFLPEEGEAKYTPEEIGAVFKH
LQAKIVRWNVLDTKSRIDGRDLSTVRPIVSEVGILPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKIALEQAQGGRKHILGEMAN
AITESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
SSGKEIEAARKWIHSIVAEPEVGAIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQESGKEIVADKKKEDGEAAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaacactccgtggaaatcgaatgggcaggccgcccgctgaagctcgagacc
ggcaaggttgcccgtcaggctgatggcgccgtcatcgcaacctacggcgagaccatggtt
ctcgcgactgtggtttccgctaagtctccgaagccgggtcaggatttcttcccgctcacc
gtcaactatcaggaaaagacctacgcagccggcaagatccccggtggttacttcaagcgt
gaaggccgtccgagcgaaaacgaaacgctggtctcgcgcctgatcgaccgcccgatccgt
ccgctcttccctgaaggctacaagaacgacacccaggttgtcgtcaccgttatccagcac
gacctggaaaacaatcctgacatcctctccatgatcgccacatccgcggcgctcacgctt
tccggcgttcccttcatgggcccggttggcggcgcgcgcgttggctacatcaacggcgaa
tatgttctgaacccgcatctcgacgagatggatgagtcggttctggacctggttgttgcc
ggcacgcaggacgccgtcctgatggtggaatcggaagccaaggaactgaacgaagacgtc
atgctcggcgcggtcatgttcggtcaccgcggtttccagcccgttatcgacgcgatcatc
aagctcgccgaggttgccgccaaggaaccgcgcgaattcgaaccggaagatttttccgct
ctcgaaaacgagatgctggcactcgccgaagctgaactgcgcgacgcttacaagatcacc
gaaaaggccgcccgttacgccgccgtcgacgccgtcaaggctaaggtgaaggcgcacttc
ctgccggaagaaggcgaagccaagtacacgccggaagaaatcggcgctgtcttcaagcac
cttcaggccaagattgttcgctggaacgttctcgacaccaagagccgcatcgacggccgc
gacctgtcgaccgttcgcccgatcgtttccgaagtcggcattctgccgcgcacgcacggt
tcggcgctcttcacccgcggtgaaacccaggcgatcgttgttgcgaccctcggcaccggc
gaagacgaacagtatgtcgacagcctcaccggcatgtacaaggaacgcttcctgctgcat
tacaacttcccgccctactcggtcggtgaaacaggccgcatgggctccccgggccgtcgt
gaaatcggccacggcaagctcgcatggcgcgctatccgtccgatgctgccgactgccgaa
cagttcccctacacgctgcgcgtcgtttccgaaatcaccgaatccaacggctcctcgtcg
atggcaacggtttgcggcacctcgctggcgctgatggacgcaggcgttccgcttgccaag
ccggttgccggtatcgccatgggcctcatcctcgaaggcgaccgcttcgcggttctctcc
gacatcctcggtgacgaagaccacctcggcgacatggacttcaaggtcgcaggtacggct
gacggcatcacctcgctgcagatggacatcaagatcgccggtatcaccgaagagatcatg
aagatcgctctggagcaggcacagggtggccgcaagcacattctcggcgaaatggccaac
gccatcaccgagagccgcggtcagctcggcgaatttgcgccgcgcatcgaagtgatgaac
atcccggtcgacaagatccgtgaagtcatcggctccggcggcaaagtcattcgcgaaatc
gtcgaaaagaccggcgcgaagatcaacatcgaagacgacggcaccgtcaagatcgcttct
tcttccggcaaggaaatcgaagcggcccgcaagtggatccactccatcgttgcggaaccg
gaagtcggcgccatctatgaaggcacggttgtcaagaccgccgacttcggcgctttcgtc
aacttcttcggcgcccgtgacggcctcgtccacatctcgcagctcgcttccgagcgtgtt
gccaagacctccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggcttt
gacgagcgtggcaaggttcgcctgtccatgaaggttgtcgaccaggaaagcggcaaggaa
atcgttgccgacaagaagaaggaagacggtgaagccgctgccgagtaa
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