Agrobacterium pusense CFBP5875: CFBP5875_14330
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Entry
CFBP5875_14330 CDS
T06598
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03030
DNA replication
rpus03430
Mismatch repair
rpus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP5875_14330
03430 Mismatch repair
CFBP5875_14330
03440 Homologous recombination
CFBP5875_14330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpus03032
]
CFBP5875_14330
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_14330
Enzymes [BR:
rpus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP5875_14330
DNA replication proteins [BR:
rpus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFBP5875_14330
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFBP5875_14330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QCL85849
LinkDB
All DBs
Position
linear:complement(34303..35286)
Genome browser
AA seq
327 aa
AA seq
DB search
MTSQLDFFASAAARLPETERGRKMPGRGAVQRVAMDDEGLAGYLESTGNYRILRKLLPRQ
VVERPRPEFSRRGVILDTETTGLNHRTDEIIEIGVIAFTFDDQGAIGDVTGIYGGLRQPN
VAIPAEITRLTGITDDMVAGQAIDMERLASLVGDADLIIAHNAGFDRPFCEAFSPIFNEK
AWACSVSEIDWRVRGFEGNKLGYLIGQSGYFHDGHRAVDDCFALLEVLEQNRPGQEGMTP
FMELHAASRRSRVRIYAENSPFDMKDHLKKRGYRWSDGSDGRPKSWWAELPEEMLAEELH
FLRTEIYRWDADPTVKYLTAFDRFKAG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccagttggactttttcgcttccgcggccgcgcggcttcccgagaccgaacgg
gggcgaaaaatgccgggacgcggagcggtgcagagggtcgcgatggatgacgaggggctg
gcgggctatctcgaatccaccggcaattaccgcattctgcgcaagctcttgccgcgtcag
gtcgtggaacggccaaggccggaattttcccgccggggtgtgatcctcgacaccgaaacc
acgggtctgaaccaccggacggacgaaataatcgagatcggcgtcatcgccttcacgttc
gacgatcagggcgccattggcgacgtcaccggcatttacggcggactgcggcagcccaac
gtcgccataccggcggagatcacccggctgacggggatcaccgatgacatggttgcgggg
caggcgatcgacatggagcggctggcttctctcgtcggcgatgccgatctgatcattgcc
cacaatgccggcttcgaccgtcccttctgtgaagccttctcgcccatattcaatgagaag
gcctgggcctgctccgtttccgaaatcgactggcgggtgcgtggatttgagggcaacaag
ctgggttatctgatcggtcagtccggttatttccatgatggccatcgcgcggttgatgat
tgcttcgcgctgctggaggtgctcgagcagaaccggccgggccaggaaggcatgacgccc
ttcatggagcttcacgcggctagccgtagatcgcgcgtccggatctacgcggagaacagc
cccttcgatatgaaggatcacctgaaaaagcggggttatcgctggtcggacggttcggac
ggccggccgaaatcctggtgggcggagctgccggaagagatgctggcggaggagctgcat
tttctgcgcaccgaaatctatcgctgggacgccgaccctacggtcaaatatctcacggct
ttcgaccggttcaaggccgggtag
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