Agrobacterium pusense CFBP5875: CFBP5875_15540
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Entry
CFBP5875_15540 CDS
T06598
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5875_15540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpus02000
]
CFBP5875_15540
Transporters [BR:
rpus02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CFBP5875_15540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA
AAA_21
AAA_22
SMC_N
Rad17
Mg_chelatase
SRP54
nSTAND1
AAA_25
AAA_19
AAA_30
AAA_29
ABC_ATPase
MCPVI
AAA_16
AAA_14
AAA_27
AAA_5
TOBE_2
PRK
RsgA_GTPase
AAA_23
AAA_33
TsaE
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QCL86066
LinkDB
All DBs
Position
linear:complement(289500..290525)
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AA seq
341 aa
AA seq
DB search
MSDANYLSLQKISLAYGGNVAVKDLDLDIRKGELLALLGPSGCGKTTTMRAIAGLMPVAA
GRINLDGADITRVAANKRAVGLVFQSYALFPHLTVYENVAFGLKLKGMSGKALEDKVASG
LKSVGLSNFASRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRTELQ
RVQKETGVTMIFVTHDQIEALALADRIVVMKGGKIEQIGTPEEIYNAPVSAFVADFVGFE
NIFALQGGALKTANGTTPLPGPVLSASGLAWRPRMVTLGSGPFQGTVRGTSFAGNSREYL
LDTLLGPIKAETDAALTSHAIGDTLAFDLPVEKAASLKVFN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcaaattatctttcgctccaaaaaatctcgctcgcttatggcggcaatgtc
gccgtcaaggatctcgatctcgatatccgcaagggcgaattgctcgcgcttctcggacca
tcaggctgtggcaagaccacgacgatgcgcgccatcgccgggctgatgccggtggctgcc
gggcggatcaatctcgatggcgccgatattacccgcgtcgcggccaacaaacgcgccgtc
gggctggtgttccagtcctacgcgctcttcccgcatctgacggtctatgaaaacgtcgcc
ttcggcctgaaactcaagggaatgagcggcaaggcgctggaggacaaggtcgcctccggc
ctgaagtcggtcggcctgtccaatttcgcctcacgcaagccggcggaactatcgggcggc
cagcagcaacgcgtggcattggcacgctccatggtcatggagccgaaagtgctgcttctc
gacgagccgctctccaatctcgacgcccgcctgcgtcttgaaatgcggaccgaactgcag
cgcgtgcagaaggaaaccggtgtcacgatgatcttcgtcacccatgaccagatcgaggcg
ctcgcgcttgccgaccgcattgtcgtcatgaagggcggcaagattgagcagatcggcacg
ccggaagagatttacaacgcgccggtttccgccttcgtggccgacttcgtcggcttcgaa
aacatcttcgcccttcaaggcggggctttgaaaaccgccaacggcacaacaccgcttccc
ggaccagtcctttcagcatccggactggcctggcggccgcgcatggtcaccctcggttca
ggtcctttccagggaaccgtgcgcggcacatccttcgccggcaacagccgcgaatatctg
ctcgacacactgctcgggcccatcaaggctgaaaccgacgcggccctgacctcccacgca
atcggcgatacgcttgccttcgacctgccggtcgaaaaggcggcgagcctcaaggtattc
aactga
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