Agrobacterium pusense CFBP5875: CFBP5875_15955
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Entry
CFBP5875_15955 CDS
T06598
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5875_15955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpus02000
]
CFBP5875_15955
Transporters [BR:
rpus02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CFBP5875_15955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QCL86142
LinkDB
All DBs
Position
linear:complement(394524..395564)
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AA seq
346 aa
AA seq
DB search
MKKTILLSGILMLGAAALPAQAQQTVTFLGYSGLFQERYTKAVIEPFMAANPDIKVEYFP
QQGSAAMLGSLRAQKAAPQSDIALMDVSVAKTGTDEGLFDTIDESVTKNVADLYPNARFE
GVAGVGVTFDNLVLIYNTDAVKTAPDSWNALKDSAFKGKVAMLSAPDIVGIGTTIIMDHM
NGGKDFIKNIDAGINAMAEVAPNVQTWEPKPEVYPNVVNGQVSLGVGWNARSQVNADGSK
GKMKVVLPKEGTILQINTLNLVKGGPSSEAARKFVDYALSPEAQAAFTAAMYYAPTNAKA
TVAADVSDRTVVKAMDKVIPVDWIGLSKVRDQITQDWRRKVIPLSR
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacgatacttctgagtgggattctcatgctcggtgcggctgccctgccggcg
caggcccagcagaccgtgacgttcctcggctatagcggccttttccaggagcgttacacg
aaggccgtcatcgagcctttcatggccgccaaccctgacatcaaggtcgaatatttcccg
cagcagggttctgccgccatgctcggctcgctgcgcgcccagaaagctgcaccgcaatcc
gatatcgcgctgatggatgtctctgttgccaaaaccggcacggatgaaggcctgttcgac
acgatcgatgaaagcgtgacgaagaatgtcgccgacctttatccgaacgcgcgcttcgaa
ggtgtggccggtgttggcgtgactttcgacaacctggttctcatctacaataccgatgcg
gtgaagaccgccccggacagctggaatgccctgaaagacagcgccttcaagggcaaggtc
gccatgctgagcgcccctgacatcgtcggtatcggcacgacgatcatcatggatcacatg
aatggcggcaaagacttcatcaagaatatcgacgccggcatcaatgcgatggcggaagtc
gcgccgaacgtccagacctgggaaccgaaaccggaagtctatccgaatgtcgtcaatggc
caggtatcgctgggcgtgggctggaacgcccgcagccaggtgaatgccgatggttccaag
ggcaagatgaaggtcgttcttccgaaggaaggtacgatcctccagatcaatacgctcaac
ctcgtcaaaggaggcccttcgtccgaggcggcccgcaagttcgtcgattatgcattgagc
ccggaagcccaggccgccttcaccgccgccatgtattatgcgccgaccaatgccaaggcc
acggtggctgccgatgtcagcgatcgcacggtcgtcaaggcgatggacaaggtcattccg
gttgactggatcggcctctcgaaggttcgtgaccagatcacgcaggactggcgtcgcaag
gtcattccgctcagccgctga
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