Agrobacterium pusense CFBP5875: CFBP5875_16175
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Entry
CFBP5875_16175 CDS
T06598
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5875_16175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpus02000
]
CFBP5875_16175
Transporters [BR:
rpus02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFBP5875_16175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QCL86184
LinkDB
All DBs
Position
linear:complement(441551..443146)
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AA seq
531 aa
AA seq
DB search
MTISRRQFHKIALAAGAFVALPGGSFAAAEEPVSGGTLKIVYFPEPTQLVAINTSAGGPQ
FIGSKIYDGLLTYDYELSPKPSLAREWSVSADGLEYVFHLQPKAKFHDGKPVTSADVEFS
ILRLKEAHPRGRATFANVESVDTSDPLVAKVKLSKPAPGLITALASSESPIVPKHIFETF
KPTDNPKPAQIIGSGPFVLKEWVPGSHILLEKNADYWDAPRPYLERVIIRLINDAGARAA
ALETGEGDIGPNPVALADLERLKAIPTLKVDDRIYAYAGQQNQLVINLENEYLKELKVRQ
AIAHAIDVPALIDTVLYGYAVPSPTPISPGLAKFHNPDIGFAKFDVAQAEKLLDEAGFQR
KDGGKRFKLRVTTNPFNPQTYSDFIAQALSKIGIEADIQKFDFGTYVKVVYTDRAWDLSV
ESLSNTFDPTAGVQRVYWSKNFKIGLPFSNASHYANPEVDRLLEAAAVEPDIEKRAAFFK
EFQAVVAKDLPVINLVAPIQPVVGSVRIKDYATGAEGLGGNLARAWLTKEA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttccagacgccagtttcataagatcgcacttgctgccggcgcattcgtggcg
ctcccgggcggttctttcgccgcggccgaagagccggtttcgggcggcacgctcaagatt
gtttattttcctgagccgacccagctcgtggccatcaatacaagcgcgggcggaccgcag
ttcatcggttcgaagatttacgacgggcttctgacctatgactatgagctttcgcccaag
ccgagccttgccagggaatggagcgtatcggcggacggactggaatatgttttccacctc
cagccgaaggccaaattccatgatggcaaaccggtaacatcggcggatgtggaattttcc
atcctgaggctgaaagaggcccatccgcgcggtcgggcgacgttcgcgaatgtcgaaagc
gtcgatacttccgatccgctggtcgcgaaggtgaagctctccaagccggcaccgggcctg
attaccgcgctcgcgtcgtctgaatcgcccatcgtgccgaagcacatctttgaaaccttc
aaaccgaccgacaatcccaagcctgcgcagatcatcggcagcggccctttcgtgctgaag
gaatgggtgccaggcagccatatcctgctggagaaaaatgccgactactgggatgcgccg
cgcccttatctggagcgcgtcatcattcgcctcatcaacgatgcgggcgcccgcgcggcg
gcgctggaaacaggggaaggggatattggccccaacccggtcgctcttgccgatctggag
cggctgaaagcaatcccgacactgaaggtggatgaccgcatctatgcctatgccggccag
cagaaccagctggtcatcaatcttgagaacgaatatctgaaggaactgaaggtccggcag
gctattgcccacgccatcgatgttccggcgttgatcgataccgtgctttacggttacgcc
gtgccatcgccgacgccgatcagccccggccttgcaaagttccacaatcccgatatcggg
tttgccaagttcgacgtcgcgcaggcggaaaaattgctggatgaggccggtttccagcgc
aaggatggcggcaagcgtttcaagctccgcgtcaccaccaacccgttcaatccgcagacc
tattcggatttcatcgcgcaggcgctgtcgaagatcgggattgaggccgatatccagaaa
ttcgatttcggcacctatgtgaaggtggtctacactgaccgcgcctgggacctttcggtg
gaatccctgtccaacactttcgatccaacggccggcgtccagcgcgtctactggagcaag
aacttcaagatcggcctgccattctcaaatgccagccactacgccaatccggaggtggac
cggctgctggaagcggcggcggtggagcctgacatcgagaaacgcgctgccttcttcaag
gaattccaagccgttgtcgcgaaagatcttcctgtcatcaatctcgtcgctcccatccag
ccggtcgtcggcagcgtgcgcatcaaggattatgcgacgggggccgaaggtctcggcggt
aacctggccagggcatggctgacgaaggaggcgtga
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