Agrobacterium pusense CFBP5875: CFBP5875_17430
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Entry
CFBP5875_17430 CDS
T06598
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
rpus
Agrobacterium pusense CFBP5875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_7
AAA_2
AAA
Mg_chelatase
HTH_22
HTH_23
MCM
Phage_AlpA
RWP-RK
HTH_29
HTH_28
HTH_Tnp_1_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QCL86415
LinkDB
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Position
linear:complement(699435..700979)
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AA seq
514 aa
AA seq
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MTAHVLVIDDDPVQRRLLKNAVERYGHLALLAENGKAGLELLKQYSGEINVVVLDLMMPE
MDGLGFLKAVGELGVDVPVIVQTGQGGIDTVVQAMRAGAFDFVVKPVSPERIGAAISNAL
KLDRREAKARTGRRGRSNAVNFTDIVSASPAMLRVIELAQRAAQSSIPVVLEGESGVGKE
MVARAIQSAGDRATKPFITVNCGAIPHNLVESILFGHEKGAFTGATEKHVGKFMEADGGT
LFLDEIGDLPLDVQVKLLRAVQQGEIETVGSARVQKVNVRLISATNKNLIEEVKEGRFRE
DLYYRLNVFPITIPALRRRKEDIPHLARVFAERFSAEQKLPNPVGLDASALALLTAYDWP
GNIRQLENAVFRAVVLSQGGELSDADFPQIALQLPEFSTGDDAEDVIRSPSGSSLKLAAY
SPPAPAVENHVVTDEPADVSTTIYRGGSLISSTDETGNIRKLAEIEEELIRFALRFYRGQ
MSQVARKLGIGRSTLYRKLKDYGIDPDDPLRDVA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcatgttcttgtgatagacgacgatcccgtccagcgccgcctgctcaaaaat
gcggtggaacgttatgggcacctggccctgcttgccgagaacggcaaggccggcctggag
ctcctcaagcaatatagcggtgaaataaatgtcgtcgtcctcgatctcatgatgccggag
atggatggtctcggctttctgaaagccgtcggtgaactgggcgtcgacgttccggtcatc
gtccagacggggcagggcggcatcgacacggtggtgcaggcaatgcgcgccggcgccttc
gatttcgtcgtcaagccggtctcaccggaaaggatcggcgccgccatctccaatgcgctc
aagctcgacagaagagaggcaaaggcccgcacgggcaggcgcggacggagcaatgcagtg
aattttaccgatatcgtttccgcaagccccgcaatgctgagggtgatcgaactggcgcag
cgcgccgcccagtccagcattcccgtggtgcttgagggtgagtcgggcgtgggcaaggaa
atggtcgcccgggccatccagtccgccggcgaccgggcgaccaagccctttattacagtc
aattgcggcgctattccccataatctcgtggaaagcattctcttcggtcacgagaagggc
gccttcaccggcgcgacggaaaagcacgtcggcaaattcatggaagcggatggtggcacg
ctgttcctggacgagatcggcgatctgccgctggacgtgcaggtcaagctgctgcgcgcc
gtccagcaaggcgaaatagaaaccgtcggttccgctcgggtgcagaaagtaaatgtgcgg
ctgatctcggccaccaacaagaatctcatcgaggaggtcaaggaaggccgcttccgcgag
gatctttattatcgcctcaacgtctttccgattaccattcccgccttgcgtcgccggaag
gaagatatcccccacctcgcacgggtgtttgccgaacgtttttccgcggagcagaagctg
cccaatcccgtcggcctggatgccagcgcgctggcgctgctgaccgcttatgactggccc
ggcaatattcgccagcttgaaaatgccgtcttccgcgccgtcgtgctgtcgcagggcggg
gaactgtcggatgccgattttccgcagatcgcgctgcaactgccggaattctcgacaggc
gatgacgcagaggatgtcatccgctcgccatccggatcgtcactgaagctcgcagcctat
tcgccaccggcaccagccgtcgaaaaccatgtcgtcacggatgaaccggcggatgtttcc
accaccatttacaggggaggaagcctgatctccagcacggatgagacaggcaacatccgc
aagctggcggagatcgaagaggagcttattcgtttcgccctgcgtttctatcgcgggcag
atgagtcaggttgccagaaagctcggcatcggccgctcgacactttatcgcaagctgaag
gattacggcatcgatcccgatgatccacttcgagacgtcgcatga
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