Agrobacterium pusense CFBP5875: CFBP5875_19850
Help
Entry
CFBP5875_19850 CDS
T06598
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus00260
Glycine, serine and threonine metabolism
rpus01100
Metabolic pathways
Module
rpus_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFBP5875_19850
Enzymes [BR:
rpus01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CFBP5875_19850
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CFBP5875_19850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
HI0933_like
AlaDh_PNT_C
Thi4
GIDA
FAD_binding_3
Fer2_BFD
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
QCL86843
LinkDB
All DBs
Position
linear:1241972..1244932
Genome browser
AA seq
986 aa
AA seq
DB search
MSGDYRIKGAGRLTPARTARFTFDGKIYPALEGDTVASALLANGVHLIGRSFKYHRPRGF
LSAGPEEPNALIDVSRDSLRKQPNVRATVQEVFDGAIIASQNRFPSLSFDLSAINDVLSP
MFAAGFYYKTFMWPKAAWHKIYEPLIRRAAGLGKAPSEPDADHYSGRYAHCDVLVAGAGV
AGLTAALSAAKTGASVILVDENAEVGGALRFDAGAVIDGLAGYEWAQKVFAELKSLPNVR
VLTRTTAFGYYNHNFVALAERVTDHLATPAKHQPRERLWQVRAKKVVLAAGAIERHMVFA
NNDRPGIMLASAARTHLNHYGVAVGHNVGVYTAHDSAYETAFDLKKAGVKIAAIVDCREN
PDQRLLDEARALGIEVLAGHSVYNTAGRLRISSMTVGRNGGSNKRKIAIDALVVSAGWTP
SVHLFSQSRGKLRFDAANQRFLPDIHVQNCVSIGACNGTDDLSALIAEAAAAGGGAVAFS
GENARAWTGGMIGAAEGAGEGTGVKAFIDFQHDVCAKDIRLAVREGMHSVEHIKRFTTNG
MASDQGKMSNMHGLAIASEALGRDLPKVGLTTFRQPYTPVTFGTLINHSRGALFDPARKT
PMHDEELAAGAVFEDVGNWKRAWFFPRAGEDMHEAINRECKTVRESVGVFDASTLGKIEV
VGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFHVTTTTGGA
PRVLQHMEDYLQTEFPDLNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDLSPEAFPHM
AVAEGNFCGVPTRLFRVSFTGELGFEINVPADYGAAVWSAIRERAEAVGGCLYGTETMHI
LRAEKGYIIVGQDTDGTVTPDDAGLAWAVSKKKTDFVGIRGLKRPDLTRSGRKQLVGLKT
KDRLTVPDEGGQIVADPNQPKPMTMLGHVTSAYWSENLGHSIAFALVADGRARMGETLYI
PLADKTIAVEVTDMVFLDKEGARLNG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgattatcgtatcaagggcgcaggccgtctcacgccggcgagaaccgcgcgc
tttacctttgacggcaagatctatccggcgctggagggcgacaccgtcgcgtcagccctt
ctggccaatggcgtgcatctgatcggccgctcgttcaaataccaccgtccgcgtggtttc
ctgtccgccgggccggaggagccgaatgcgctgatagacgtgtcccgtgacagcctgcgc
aagcagcccaacgtgcgcgccacggtgcaggaagtcttcgacggcgcgattatcgcctcg
cagaaccgttttccgtcgctctccttcgatctgagcgcgatcaacgatgttctgtcgccg
atgttcgcggccggtttctactacaagacgttcatgtggccgaaggccgcctggcacaag
atttacgaaccgctgatccgccgcgccgccggtctaggcaaggcgccgagcgagccggat
gcggatcattattccggccgttatgcccattgcgacgtgctggtggccggcgccggtgtc
gccggtctcacagctgcgctttctgccgcgaaaactggcgccagcgtcattctggtggat
gagaatgcggaagtcggcggagccctgcgtttcgatgccggcgcggtcatcgacggtctc
gccggttatgaatgggcgcagaaggtttttgccgagctgaagtcgctgcccaatgtgcgg
gttctgacgcgcacgaccgcctttggttattacaaccacaattttgtcgcgctcgccgaa
cgcgtcaccgatcatctcgcgacgccggctaaacatcagccacgcgagcgcctttggcag
gtccgcgccaaaaaggtcgtgctggcggccggtgcgatcgagcgccacatggtcttcgcc
aacaatgaccggcctggcatcatgctggcttcggccgcccgcacccatctgaaccattac
ggcgtcgccgtgggccacaatgtcggtgtctacaccgctcatgattccgcctatgagact
gcctttgatctgaagaaggccggggtgaagatcgccgccatcgtcgattgccgcgaaaat
ccggaccagcgtctgctggacgaggcccgggcgctcggcatcgaagtgctggcgggtcac
agcgtttacaacaccgccggccgcctgcgcatatcttccatgacggtcggccgcaatggc
gggtcgaacaagcgcaagatcgccatcgacgcgcttgttgtctccgccggctggacgcct
tcagtgcatctgttctcgcaatcgcgcggcaagctgaggtttgacgcggctaaccagcgt
ttcctgcctgacattcatgtgcagaactgcgtctccatcggcgcctgcaatggcacggat
gatctttcggcgctgatcgccgaggccgcggctgcgggtggcggcgcggtggcgttttcc
ggtgaaaacgcccgggcctggacaggcggcatgattggtgcggcggagggtgcaggcgag
ggcaccggcgtcaaggctttcatcgatttccagcacgatgtctgcgccaaggatattcgc
cttgccgtgcgcgagggcatgcattcggtcgagcatatcaagcgcttcaccaccaatggc
atggcgtccgaccagggcaagatgtcgaacatgcatggccttgccattgcatcggaagcg
ctcggccgggatttgcccaaggtcggcctcaccaccttccgccagccctatacgccggtt
actttcggcacgctcatcaaccattcacgcggcgcgctgttcgatcccgcgcgcaagacg
ccgatgcacgacgaagagctggcggctggcgcggtattcgaggatgtcggcaactggaag
cgtgcctggttcttcccgcgggcgggcgaggacatgcatgaagcgatcaaccgtgaatgc
aagacggttcgtgagagcgttggcgtgtttgatgcctccaccctcggcaaaatcgaggtg
gttggcccggatgcggcgaagttcctgaacctcatctacaccaatgcctgggatacgttg
aaacccggccgctgccgttatggcatcatgacccgcgaagacggcttcgtttacgatgac
ggcgttgttgggcgcctggccgaagaccgtttccacgtgacgacgacgacgggcggcgcg
ccgcgcgttctccagcacatggaggactatctccagaccgaattccccgatctcaatgtc
tggctgacatcggcaaccgaacaatgggccgtgattgccgtgcaggggccgaaggcgcgc
gaggttatcgcgcctttcgtcgagggtatcgacctttcgccggaggcctttccgcatatg
gcggtggcggaaggcaatttctgcggcgtgccgacgcggcttttccgcgtctccttcacc
ggcgaactcggtttcgaaatcaatgtgcctgccgattacggcgcagcagtctggtctgca
atccgggagagggcggaagccgtcggcggctgcctctatggtaccgagacaatgcatatc
ctgcgtgccgaaaagggctatatcatcgtcgggcaggatacggacggcaccgtgacgccc
gatgatgccgggcttgcctgggctgtctccaaaaagaaaacggatttcgtcggtattcgc
ggtctgaaacgccccgatctaacgcgctccggccgcaaacagcttgtcggcctgaagacg
aaggaccggctgaccgttccggacgagggcggtcagatcgttgccgatccaaaccagcca
aagccaatgaccatgctcggccacgtcacctccgcttattggtcggaaaatctcggccac
tccattgctttcgccttggtggcggatggcagggcgcgcatgggcgaaacgctctatatt
ccgcttgccgataaaaccattgccgtcgaagtgaccgacatggtcttcctcgacaaggaa
ggagcccgtctcaatggctga
DBGET
integrated database retrieval system
