Agrobacterium pusense CFBP5875: CFBP5875_21655
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Entry
CFBP5875_21655 CDS
T06598
Name
(GenBank) autotransporter domain-containing protein
Organism
rpus
Agrobacterium pusense CFBP5875
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
G8
Motif
Other DBs
NCBI-ProteinID:
QCL87159
LinkDB
All DBs
Position
linear:1639874..1643845
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AA seq
1323 aa
AA seq
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MSGCFCLFLDGETSPESIACRKAAGRLSVFGTGWFLSILLSVSLGQSACAENLNWTGAGG
GSWSASTNWAPSARVPDAGDDVLINSDGPVVVTNTSATANSVTVGQVSSGTLVINGSLLS
NSLSLGVAAGIGGTVTFSGATLQNQGLLSVGGNGIGTLSLLHGSAVSTGTVYIGEGATGN
GFLTLDNSSSLVTAGTIFVGYGGGSAPSGGGNGELKILAGSTVDSQRAILGEGAGTEGAT
LISGAGSRWTVAADTVIGNAGVSTLTVTGGGKLLSGTTTVIANLYSASGSEVTLTRLGSS
LETGQLIVGNEGSARLTVEAAASATSDSAIIGRHSTSVATVTGDGSTWVAGDLQIGGDVA
DPGGASGNGTLNVTAGGKVNSTAARLGTVAGATGAAIIDGEGSAWTVGSGGLAIGDAGTG
SLAVTGGGIVGSQAVVLGNSAASTGSARISGVGSTLRSEGDIIVGRGGNAMMSVEAGGAV
ESRNGVVAALGGSSSSVTVTGGGSSWTMTGTLIAGYQDTASAEVTASAGGNIRAGEVVLG
DLSGSSGTMTIMGASSNVTAYVDSGLGASGRMTVGQSGSGGLTVTNGASLNAYLFSVGSS
AGSDGAVLVNGIGSRVSVGDTLVIGAAGNGSVEVTGGAALAAPTILIASSAGSAGVLNVG
AASGQTARSAGTIDAQAISFGAGAGRIVFNHSQTAYLVKADISGAGSVVAENGVTTLAGN
NSYSGGTTISGGTLKGIAGSFGSGEIANDAALVVDGAGRLSNSIHGTGSFEKTGAGNLEL
SAVSTYLGPTTVSGGKLSVNGSLASAVSVVDGAALGGTGTVAGLSIGPGGTLAPGNPLGT
LTSTGDATFAAGGKYAVDIDTAGNSDRLAVNGTVTIANDVTLVVTPLTNRSAFSLNTRYQ
ILTATGGITGAFSRIDESFAYLTATIAKSDDTGTAYLSFSPASSAPGFLAAQAITANARA
AANAVEALGENAALYRSAIFLQGGETQLAFSQLSGEIHPSVAMTLINRSSQTRDVILERL
RRAFDSIDARPIMPVAYAKDDRDLLFEEVGSPSFWTSGLGSRGRVDGDGNGSSVDSEGGG
ILFGLDGELGKSWRAGVAGGYSHERIEQKTFAASAEVDSYFVAAYAGTMIGPASLRFGAI
HAFQDMDTRRSVSFSTLSENLSASYGGSTSQVFAEAAWRFDFDLTHVEPYANIAYVNSRT
GDFGEKGGIAAVSSASARYDQLYTTLGARITRDVALEGMLGRAMFDLAWRHNYGDTDMNS
SLFYEGGEAFSVVSTRGSRDAATLNLGLSYDLTPSATLTFRYGAVFGAGLLDQSAAAELG
VRF
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttgtttctgcctctttttggatggggaaacctctccggaaagtattgcatgc
aggaaagctgccgggcgcctttcggtgttcggcacaggctggtttttgtcgattcttctt
tccgttagccttggtcagagtgcttgtgcggaaaacttgaactggaccggcgctgggggc
ggcagttggtctgcctcgacgaactgggcgccgtcagcccgcgtgcccgatgccggcgat
gacgtgttgatcaacagcgatggcccggttgtcgtgaccaacacatctgccacggccaat
tccgtcacggtcgggcaagtttcgtccggtactttggttatcaatgggagcttgttatca
aattcgctcagccttggcgtcgccgcgggaatcggtggtaccgtcacgttctcgggcgcg
accctgcaaaaccagggtctcttatcggtcggcggtaacggcatcggtaccctctccctg
ttacatggcagcgcggtctcgaccgggaccgtctacatcggcgaaggggcaacagggaac
ggtttcctgacactcgacaattcgtccagtctcgttacggcaggcacgatctttgtggga
tacggcggcgggtccgcgccctccggcggcggaaacggcgagcttaaaattcttgccgga
agcacggtagacagccaaagggccattctgggcgagggggctggaaccgaaggtgccacg
cttatatcgggcgccggcagccgctggacggttgcagccgacaccgtcatcggcaatgcc
ggtgtcagcacactcacggtgacgggcggcggaaaactcctcagcggaacgacaaccgtc
attgccaatctttattccgcatcgggaagcgaagtcactcttacccggctcggctcttca
ctggaaaccggtcaattgatcgttggaaatgagggcagtgctcgcctgactgtcgaggcg
gcggcatcagcgaccagcgacagcgccatcatcggacgccattccacctccgttgcgacg
gtgaccggcgacgggtccacctgggtcgcgggcgatcttcagatcggtggcgatgtcgcc
gaccccggcggggcttccggtaacggaaccttgaatgtgaccgccggtggcaaggttaat
agcaccgccgcccggctcggcactgttgccggtgcgaccggggcagccattatcgatggc
gagggatcggcctggactgtcggcagtggcggccttgcgatcggcgatgccggcaccgga
tcgttggccgtaacgggtggcggcatcgtcggcagtcaagccgtcgtactcggcaacagt
gccgccagtaccggctccgcccggatttccggcgttggcagcacgttgcgcagcgagggt
gacatcatcgtcggtcgcggtggcaacgccatgatgtcggttgaagcagggggggctgtc
gagagtagaaacggtgtcgtcgctgcgctcggcggttcgtcgtcatcggtcactgttacc
ggcggtggctccagctggacgatgaccggtaccttgatcgccggttatcaggacacggct
tcggccgaggttacagccagcgccggcggaaatatccgggcaggggaggtggtcctggga
gatctttcgggctcatcgggaacgatgaccatcatgggtgccagctcgaatgtaacggct
tacgtcgatagcgggcttggggcttccggccgcatgacggtcggacaatccggttccggc
ggtttgactgtgacgaatggtgcgtcgctcaatgcctatctgttttccgtgggttcttcg
gcggggtctgatggggccgtcctcgtcaacggcatcggctcgcgcgtctccgttggcgac
accttggtcatcggcgctgcggggaacggcagcgttgaagtaaccggcggcgcagcgctc
gcggcgcctaccatcctcattgcgtcgtctgctggttcggctggcgtcctgaatgtcggc
gcagcttccggacaaacggcccgttcggccggcaccattgacgctcaggcgatcagcttt
ggagccggcgctggccggatcgttttcaatcactcgcagacggcgtacctcgtaaaagcc
gatatttcgggagcgggcagcgttgttgctgaaaatggcgtgacgacgcttgctggaaac
aacagctattccggcggcaccacgatatctggcggtaccttgaagggaatcgctggaagt
tttggctccggcgagatcgccaatgacgcggcgctggtcgtggatggcgccggcaggctt
tcgaattcgattcacggcacgggcagtttcgaaaagactggcgcaggcaacctcgaactc
tcggccgtcagcacttatctgggtccgacgacagtctcaggcggaaagctgagcgtcaat
ggctcgttggcgagcgcggtttcagtggtcgacggcgcggcgctcggcggtacgggtacc
gttgccggcctttccatcggtccgggcgggacgctggctccgggtaacccgcttggaacg
ttgacatcgacaggcgacgctacattcgctgcgggcggcaaatatgcggttgatatagat
accgccgggaattccgacaggcttgctgtgaacggtaccgtaacaatcgccaatgatgta
accctcgtcgtcacgccgctgacgaaccgatctgctttcagtctgaatacgcgctaccag
atactcactgcgacgggtggcataaccggcgctttttcccgcatcgatgagagctttgcc
tatctgaccgcgaccatcgcaaagagcgacgacactggcaccgcttatctgtcgttcagc
ccggcatcgtcggcccccggatttcttgccgcgcaagcgatcacggccaatgcgcgagcc
gcggccaacgccgttgaggccctcggagaaaatgcagccctgtatcggtctgccattttc
cttcagggcggtgaaacgcaactggcattttcgcagctttccggagaaatccacccgtcg
gttgccatgaccttgatcaatcgcagcagccaaacccgggacgtcattctggaacggctg
cgccgcgctttcgacagcatcgatgcgcggccaatcatgcccgtcgcttatgcgaaggac
gacagggacctcttgttcgaggaagtaggatcgccgagcttctggaccagcggtttggga
tcgcgtggacgtgttgatggcgatggcaatggctcatcggttgatagcgagggcggcggc
attctgttcggacttgatggtgagctcgggaaaagttggcgcgctggtgtggcgggcggt
tacagtcacgagaggatcgagcagaagacatttgctgcttcagcagaagtcgacagttat
tttgtggctgcttatgcgggaacgatgatcgggcctgcgtctctgcggtttggggcgatc
catgcttttcaggatatggatacgcgccgctcggtctctttctcgacactgagcgaaaac
ctctccgccagctatggcggctcgacgtcgcaggtctttgccgaagcagcctggcgtttc
gattttgatctgacccatgtcgagccctatgccaacatcgcctacgtaaacagccgcacc
ggagattttggcgaaaaaggcgggatcgccgcagtatcctcagcatcggcacgctacgat
cagctttacacgacgctcggcgcgcgcatcacgagggatgtcgcgctggaaggcatgctt
ggccgcgcaatgttcgatctcgcctggcgtcacaattatggcgacactgacatgaacagc
agccttttctacgaaggcggcgaggcgttttcggtcgtgagcacgagaggttcgcgagac
gcagcaacacttaatctggggctaagctacgatctcacgccatcggctacgttgacattc
cgttatggtgcagttttcggcgctgggctgctagatcagtccgctgccgccgaacttggg
gttcgcttttga
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