Agrobacterium pusense CFBP5875: CFBP5875_23445
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Entry
CFBP5875_23445 CDS
T06598
Name
(GenBank) IclR family transcriptional regulator
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP5875_23445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpus03000
]
CFBP5875_23445
Transcription factors [BR:
rpus03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CFBP5875_23445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR
HTH_IclR
MarR_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QCL87585
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All DBs
Position
pAtCFBP5875:complement(31776..32603)
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AA seq
275 aa
AA seq
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MGRSTLMCQGGCMTADQQSSQISDTVPALRRAVRILDVVAGSPQHLTAAELTRLMDMPKS
TAHGLLAVMVELDLLAKSADGTLRIGPHSLRWANGFLSHLDIVSTFNDHLAQRHDLDPYT
VTLTVREGGEVVYIGCRNSAQPLGHTFRIGMRLPAPFTATGKILLSDLGPGELRMLFSQF
PQPLTSRSVAGLSQLEEELALTRARGYSIDDGQIREGMLCIGAAICDYSGAASAGIAISL
IRSEASDQKIAYLGEELRTTANALSEKLGYRSQKD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgggccgaagcacgctgatgtgtcaaggaggttgcatgaccgcagatcaacaatcgtcg
caaatatcagacactgtgccggcactcagacgtgcagtgcgcattcttgacgtggttgcc
ggctccccccagcacctgacagccgcagaactgacccgcctcatggatatgcccaaaagc
acggcgcatggcctcttggcagtcatggtggagcttgatcttcttgccaaatcggcggac
ggaaccttgcgtattggaccccactcgctcagatgggcgaacggctttctgtcgcacctc
gatatcgtatcgacattcaacgaccatctcgcccagcgccacgatctcgatccctatacg
gtgaccctcaccgtccgcgagggtggcgaagtcgtttacatcggctgtcgcaactcggct
cagcctcttggacacacgtttcggatcggtatgcgtctgccggcgccatttactgccacc
gggaagatcctcctgtccgatctggggcccggtgaattgaggatgttgttctcgcaattt
ccacagcctctgacatcaaggagcgttgctggcctttcgcagcttgaagaggaactcgct
ctgacgcgcgctcgcggctactccatcgacgatggtcagatccgcgaaggtatgctttgc
attggcgcagcgatatgcgattactcgggagccgcatctgccggcattgcaatcagtctg
atccgcagcgaagccagcgaccaaaaaatcgcgtaccttggtgaggagcttcgcaccact
gccaacgcgctttctgaaaagcttgggtaccgatcgcagaaagactag
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