Agrobacterium pusense CFBP5875: CFBP5875_23895
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Entry
CFBP5875_23895 CDS
T06598
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rpus
Agrobacterium pusense CFBP5875
Pathway
rpus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rpus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CFBP5875_23895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpus03400
]
CFBP5875_23895
DNA repair and recombination proteins [BR:
rpus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CFBP5875_23895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Coilin_N
Motif
Other DBs
NCBI-ProteinID:
QCL87658
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All DBs
Position
pAtCFBP5875:complement(119441..120340)
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AA seq
299 aa
AA seq
DB search
MVAPRANWKGFIKFGEVACPVALYTAASSSERIAFNTLNRRTGNRVKREFIDSETGDPVE
RDAQVKGYEIENGQYIVLEPDEVAAAVPHSDKTLKIDAFIPCSEIDSVYFDKPYFLAPDR
MGTDAFVLLRDGMKRAKVAAIARTVLFRRLRTVLIRPHGKGLIATTLNFDYEVRSSAEAF
EELPDLKIEGEMLELAAHIIGTKKGTFDASTFDDRYEAAVAELVKAKIEGRALPKKKAAA
VPRQNDLLQALRESAGMGTKSSQKRAASNANKSAGRQKASKSGAAAKSNAVSSQTRRAG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttgccccgcgagcgaactggaagggctttatcaaattcggagaggtcgcgtgtcct
gtggctctctacactgcggcatcatcatcggagcggatcgctttcaacaccctcaatcgg
cgaaccggcaaccgggtgaaacgcgaatttatcgacagcgagaccggcgatccggtggaa
cgggacgcccaggtcaagggctatgagatcgagaacggccagtacatcgttctcgagccg
gacgaggtggctgcggccgtgcctcacagcgacaagacgctgaagatcgacgccttcatc
ccctgcagcgagatcgacagcgtctatttcgacaagccgtattttctggcgcccgacagg
atggggacggacgctttcgttcttttgcgcgatggcatgaaaagagccaaagttgctgcg
atcgcccgcaccgtgctcttccgacgcctgcgtacggtgctgatcaggccacacgggaag
ggcctgatcgccacgacgctcaactttgactatgaagtccgctcgtcggcggaggccttc
gaggagttgccggacctgaagattgaaggcgagatgcttgagctcgccgcgcacattatc
ggcacaaagaaggggaccttcgacgccagcacgttcgacgaccgttatgaggccgccgtt
gccgagctggtgaaggccaagatcgagggcagggccctgccgaagaagaaggccgcagcc
gtcccccggcaaaacgaccttttgcaggcgctgcgtgagagtgctggcatgggcaccaaa
tccagccagaaacgtgccgcttctaacgccaacaagagtgctggccgtcagaaggcttca
aaatcgggtgctgctgccaaatcaaatgcggtctcgtcacagacgcgccgcgccggctga
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