Rickettsia prowazekii RpGvF24: MA7_00920
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Entry
MA7_00920 CDS
T01793
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rpv
Rickettsia prowazekii RpGvF24
Pathway
rpv03030
DNA replication
rpv03430
Mismatch repair
rpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MA7_00920 (holA)
03430 Mismatch repair
MA7_00920 (holA)
03440 Homologous recombination
MA7_00920 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpv03032
]
MA7_00920 (holA)
03400 DNA repair and recombination proteins [BR:
rpv03400
]
MA7_00920 (holA)
Enzymes [BR:
rpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MA7_00920 (holA)
DNA replication proteins [BR:
rpv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MA7_00920 (holA)
DNA repair and recombination proteins [BR:
rpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MA7_00920 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPD_arch
Motif
Other DBs
NCBI-ProteinID:
AFE53206
LinkDB
All DBs
Position
227955..228920
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AA seq
321 aa
AA seq
DB search
MQFYFSQIGRLFELIAAGKIRALLLYGPDKGYIEKICTYLIKNLNMLQSSIEYEDLNILS
LDILLNSPNFFGQKELIKVRSIGNSLDKNLKTILSSDYINFPVFIGEDMNSSGSVKKFFE
TEEYLAVVACYHDDEAKIERIILGKLAKTNKVISKEAITYLKTHLKGDHALICSEINKLI
FFAHDVHEITLNHVLEVISSEITANSSNLAIYFSKKDYSNFLQELDILKKQNINEVLIIR
ALIRHYLNLYIVLSKVKNGECLEIAIKSLSPPIFYHNINDFTKIVHALSLTECIKTLKLL
QQAEVDYKLNPASFDLFQSIL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttatttttcgcaaataggtagattatttgaattaatagcagccgggaagatt
agggctcttttactatatggtcctgataaaggctatatagaaaagatttgtacatattta
atcaaaaacttgaatatgctacaatcttctatagaatatgaagatcttaatattttatct
ttagatatattacttaattcacctaatttttttggtcaaaaagaattaattaaagtgaga
tcaattggaaattcactcgataagaatttaaaaacaattctaagcagtgattatataaat
ttccctgtatttataggggaagatatgaattctagtgggagtgttaaaaagttttttgaa
acagaagaatatttagcggtagttgcttgttatcatgacgatgaagcaaaaattgaacga
attattttaggtaaattagcaaaaactaataaagttataagtaaagaagctatcacttac
ttaaaaactcatttaaaaggtgatcatgctttaatttgtagcgaaatcaataaattgata
ttttttgctcatgatgtacatgaaattactttaaaccatgttttagaagttataagtagt
gaaattacagcaaatagtagtaatttggcaatatatttttcaaaaaaagattatagtaat
tttctgcaagagcttgatattttaaaaaaacaaaatattaatgaagttttaattattaga
gctttaataaggcattatttaaatttatatatagttttatcgaaagtaaaaaatggtgaa
tgtttggaaattgcaataaaatcattatcaccgccgattttctatcataatattaatgat
tttacaaagatagtacatgctctcagcctaactgaatgtataaagactttgaaactacta
caacaggcagaagtggattataagttaaatcctgctagtttcgatttatttcaaagtata
ctctaa
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