Rickettsia prowazekii RpGvF24: MA7_03765
Help
Entry
MA7_03765 CDS
T01793
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rpv
Rickettsia prowazekii RpGvF24
Pathway
rpv03030
DNA replication
rpv03430
Mismatch repair
rpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MA7_03765 (dnaE)
03430 Mismatch repair
MA7_03765 (dnaE)
03440 Homologous recombination
MA7_03765 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpv03032
]
MA7_03765 (dnaE)
03400 DNA repair and recombination proteins [BR:
rpv03400
]
MA7_03765 (dnaE)
Enzymes [BR:
rpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MA7_03765 (dnaE)
DNA replication proteins [BR:
rpv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MA7_03765 (dnaE)
DNA repair and recombination proteins [BR:
rpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MA7_03765 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF5487
Motif
Other DBs
NCBI-ProteinID:
AFE53764
LinkDB
All DBs
Position
complement(972114..975662)
Genome browser
AA seq
1182 aa
AA seq
DB search
MQPEFIHLRTQSSYSFLESALTIEKVVELALLHKMPALCLSDRGNLFGSLEFSLYAVKKK
LQPIHGVILNIQYDINAFAQILLIAKDETGYKNLLKLSSLTFTKNDRKICEHIGFEDLIK
YQEGVIALCCYTDGIVGKCLLARKQEQAILFARRLQAILGDRFYFEIMRHDLPEEQFIEN
SYIQIASELSIPIVATNKVLFSEKSMHYAHDVLLCISEGVTKEYPDRKTVSENCYFKSPA
EMRKLFSDLPNAIQNTINLRERCYFAAHPNPPMLPNFSTQDISETYLIRKYATEGLLARL
VTKFKAENISLEHQEKLKTEYFTRLNYELDIICNMNFAGYFLIVSDFIKWSKKQGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGPNRVGQIITFGKMQAKAVIKDVARVLSLPYKLADYLTELVPFSAINPVSLEQAIREV
PELANAAKGNGLYNLEGDAELIKLVLDTSLILEGLHRHSSTHAAGIVIAGTDLVDIVPVY
KDANADMLIVGYSMKYSEIAGLIKFDFLGLQTLTVITNCKKLLKEQGIKIDFDDMTFDDK
KTYQMLCKGKGVGVFQFESIGMKDALRRLKPDSIHDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHKLLEPILEETYGVVIYQEQVQRIAQVLAGYTLGAADLLRRAMGKKIKKEME
EQEKIFVKGAIANNISPSQAKSIFSTVAKFAGYGFNKAHAAAYGVISYQTAYLKANYPAE
FLVACLNLELNNHDKINLFLQEAKDNGIKIIAPNINISEGYFSVKSSNTVITHSTKSVIS
RLNCDIKKIAKDTAVKPLYCKDESTIIFALGAIKGVTANFGKLVTDERKARGAFKSITDF
IERLPPKSINSKLLENLIKAGCFDELHDNRLQLFLSIPKLIAYSTSYHQEQESNQFSLIK
VSSLSPTILVSSDYADKNTLAFYEFEAMGLFLSNHPLTEYQGIFSRLNILNTRDLYNKLP
NGTNRVTLAGVIQKKDSRMSARGRFVTLVLSDPENIFELTIFSEEVLKDYVHLLDVKSLV
VVNCDIVKDEGGIKLTAKSFLSIEDVMNNRQFELQLYPQNYAELEQIITLLASRTSNGYQ
SNAKATIYLQSKDVKHFIAKITLSETFFLQVQDFEVLNQYIR
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgaatttatacatttaagaacgcaaagctcttattctttcttagaaagtgcc
ttaacgatcgaaaaagttgtagaacttgctttattacataaaatgcctgctctttgtttg
tcagatagaggtaacttatttggctcactagagttttcattatacgcagtaaaaaaaaaa
ctgcagccaatccacggggttattcttaatatacaatatgatataaacgcttttgcacaa
attttgttgatagctaaagatgaaaccggttataaaaatttactcaaactgtcaagcctg
acttttactaagaatgatcgtaagatatgtgagcacattggttttgaagatttaatcaaa
tatcaagagggagtaatagcgttatgttgttatactgatggtattgtcggaaaatgcttg
ctagctcgtaagcaggaacaagcgattctgtttgctcgtagattacaggcaattttagga
gaccgtttttactttgagattatgagacatgatttaccagaagaacagtttattgagaat
agttatattcagatagcttctgaattatctattccaattgttgctactaataaagtgttg
tttagtgaaaaaagcatgcattatgcacatgatgtattgttatgtatatcagaaggtgtt
actaaggaatatcctgatcgtaaaacagttagtgagaattgttattttaaatctcctgct
gaaatgagaaaattgttttctgatctacctaatgcaattcaaaataccatcaatttaaga
gaacgttgttattttgcggcacacccaaatccaccaatgctgcctaatttttcaactcaa
gatattagtgaaacatatttaattagaaaatatgcaacagaggggttgcttgcacggctg
gttacaaagtttaaagctgaaaatatttctctagaacatcaagaaaaattaaaaactgaa
tattttactcgtcttaattatgagctggatattatttgtaatatgaattttgccggttat
tttttgattgtatcagattttattaaatggagcaaaaaacagggtattttagtaggacct
ggtagaggttctggagctggatcagttgttgcgtggagcttacttattactgacctcgat
ccgattaaattcggtttgttatttgaaagatttttaaatcctgaacgtatttcaatgcct
gattttgatattgatttttgtcaagaaaggagagaggaagtaattaattatgtacgttct
aaatacggtcctaatagagtaggacaaattataacttttggtaagatgcaggcaaaagct
gtaattaaggatgttgctcgtgtacttagcttaccttataaattggctgattatctcact
gagcttgtgccttttagtgctattaatccagtgagtctagaacaggcaatacgtgaagtc
ccagagcttgcaaatgctgctaaaggtaatggactatataatttagagggtgatgcagag
ttaattaagttagtgcttgatacttcgttaattcttgagggactacatagacattcctca
acccatgctgcaggaatcgtaatagcagggactgatttagttgatatagtacctgtatat
aaagatgctaacgccgatatgttgattgtcggttattctatgaaatattccgagattgct
ggtttaatcaaatttgattttttaggactccaaactttaacagttattactaattgtaaa
aaattacttaaagagcaaggtataaaaatagattttgacgatatgacatttgatgataaa
aagacttaccaaatgttatgtaaaggtaaaggagtcggggttttccaatttgaaagtatt
ggtatgaaagatgcacttagacgtcttaaacctgattctatacatgatttgatagccctt
ggtgcgttataccgtcccggtcccatggaaaatatccctacatatatagcttgtaaacat
aaattacagcaacctgattatttacataaattattagagccgatattggaagaaacatat
ggagtggtaatatatcaagaacaagtacaaagaatagcacaggtgctagcagggtataca
ctcggtgcagctgatttgcttcgtagggccatgggtaagaagatcaaaaaagaaatggag
gagcaggaaaagatttttgtaaaaggagcaattgctaataatatttcaccgtctcaagcg
aaatctattttttctaccgtagctaaatttgctggatatggttttaataaagctcatgct
gcagcttatggtgttatttcataccaaactgcttatcttaaagctaattatcctgctgaa
ttcttagtagcatgtttaaatcttgaattaaataatcatgataaaattaatttatttctg
caagaagcaaaagataatggtatcaaaattattgcacctaatattaatatttctgagggg
tattttagtgtaaagtcttcaaacactgtgattacgcatagcacaaaatctgtaatatct
agacttaactgtgatattaagaaaattgcaaaagatactgcggttaagccgttgtattgc
aaagacgaaagtacaataattttcgctttaggggctattaagggtgtgacagcgaatttc
ggtaagttagtaacggatgaacgaaaagcaagaggagcatttaaatcaattactgatttt
attgaaagattaccaccaaaatctattaacagtaaattgttggaaaatttaatcaaggca
ggttgttttgatgagttacatgataatagattgcaattatttttaagtattccaaaattg
attgcttattcaacgtcatatcatcaagagcaggaatctaatcaatttagcttaattaaa
gtttctagtttaagtccaactattttagtatcaagcgattatgcagataaaaatacttta
gctttttatgaatttgaggctatgggtttatttctctctaatcatcctcttactgaatat
cagggaatatttagtcgtttaaatatcctaaatactcgggatttatataataaattacct
aatggtactaaccgagtaacgcttgctggtgtaatacaaaaaaaggattctcgcatgtct
gcaagaggtagattcgtaactcttgttctttctgatcctgaaaatatctttgaacttact
atttttagtgaggaagttttaaaagattatgtacatttacttgatgttaaaagcttagta
gtcgttaattgtgatatagttaaagatgaaggtggaataaaactcacggccaaaagcttt
ttatcaattgaagatgtaatgaataatagacaatttgaactacaactttacccacaaaat
tatgcagaattagagcagataataacattgcttgcatcgcgcactagtaatggatatcaa
agtaatgctaaagctacaatctatttacaaagcaaagatgtaaagcattttatcgcaaaa
attacattatctgaaacgttttttcttcaagtgcaagattttgaggtattaaatcaatat
attcgatga
DBGET
integrated database retrieval system
