Rickettsia prowazekii Chernikova: M9W_02425
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Entry
M9W_02425 CDS
T01789
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rpw
Rickettsia prowazekii Chernikova
Pathway
rpw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M9W_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpw03019
]
M9W_02425
03016 Transfer RNA biogenesis [BR:
rpw03016
]
M9W_02425
Enzymes [BR:
rpw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M9W_02425
Messenger RNA biogenesis [BR:
rpw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M9W_02425
Transfer RNA biogenesis [BR:
rpw03016
]
Prokaryotic type
tRNA degradation factors
M9W_02425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_DUF2096_C
S1_RRP5
KH-I_KHDC4-BBP
KH_2
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AFE49310
LinkDB
All DBs
Position
619283..621520
Genome browser
AA seq
745 aa
AA seq
DB search
MFNEITKSVMWNGQVLEISTGKIARQANAAVTVKMGNSILLCTCVVANKVKDGIGFFPLT
INYREMAYSAGKIPGGFFKREGKASDREILVSRLIDRPIRPLFHQAFMHETHVTCSVLSY
DPATPVDILAIIGASAALSISPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTEDSVMMVESEAHLLSEDKMLEAVKFGFESFQTVIKLIKELAKEAKKPKFEMQDLYPSS
LKKEIEKLFTKEVEQAFEIKSKQERSTDLALIYEKVLTHFVRDIENKKYNNYQIESALKA
ISADILRNKILEKNIRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSTTFGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAMPMKAPSRREVGHGKLAWRAINPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMHAGVPIKAPVAGIAMGLVKESNKFAVLS
DIIGDEDYFGDMDFKVAGTSQGITALQMDIKISGIDFKIIQIALEQARLGRLHILEQMNK
VISKPNSELSKNAPSSTTVKIDKDKIKDIIGPGGKIIKEICETSNAKIDISDDGTVSIYA
SDRDKIKIALDKIKAIAVEPEIGEIFNGTVMKVLDSGAFINYLGNKDGFVHISEISDARI
DKVSSVLKQGDIVKVKLIGFDNKGKAKLTIKNAYKDHSSNNTKQKNNVKDDSESEQRRDT
SKKRTWNEDNNTEMSEVITERKYFT
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaaataactaagagtgtcatgtggaatgggcaagtgcttgagattagtaca
ggtaaaatagcaaggcaagctaatgcagcagttacagtaaaaatgggtaattcaatttta
ttatgtacgtgtgtagtagctaacaaagtgaaagatggtataggatttttccctttaaca
attaattatagagaaatggcatattctgctggtaagataccaggtgggttttttaaacgt
gaagggaaagcatcagatagagaaattttagtatctcgtttaatagatcgaccaattagg
ccattatttcatcaagcttttatgcatgaaacgcatgtaacttgcagtgttctttcatat
gatcctgcaacccctgtagatatacttgcaattataggtgcatctgctgcccttagcata
tcccctgccccttatctagaaatagttgctgcaagtaaagtaggtttaatcaatggtgaa
tttgttttaaatcctacacttgaattattaaaaacaagtcagcttgatttagtagtcgca
ggaacagaagattcagttatgatggttgaatcagaagcacatttactctctgaagacaaa
atgttagaagccgtaaaatttggatttgaaagtttccagacagtaatcaagctaattaaa
gaactcgcaaaagaggctaaaaagccaaagtttgaaatgcaagatttatatccttcttca
ttaaagaaagaaatcgagaaattatttacaaaagaagttgaacaagcttttgagataaaa
tctaagcaagaacgtagcactgatttagctttaatatatgaaaaagttcttacacatttt
gtacgtgatatagaaaataaaaaatataataattatcaaattgaatcagctttaaaagct
atttcagcagatatattacgtaataaaattttagaaaaaaatatacgtattgatggaaga
agcacaacagatataagacaaattgcttgtgaagtaggtttattaccgtcagcacacgga
tcagctttatttactagaggtgaaacgcaaagtttagttagtactacatttggtactagt
ttagatgaacagatagttgacagtttagagggtgaatataaagaacgttttatgcttaat
tatatctttcctccctattctgttaatgaagcaatgccaatgaaagcacctagtcgtcgc
gaagtcggacacggtaaacttgcatggcgtgctattaatccaatattacctaataaagta
caatttccttattctattagagtagttgctgaaactactgagtctaacggttcttcttca
atggctactgtttgcggtagttctcttgctttaatgcatgctggcgtgccgataaaagca
ccggttgctggtattgctatgggacttgttaaggaaagtaataaatttgctgtattatcg
gatattatcggtgatgaagattatttcggtgatatggattttaaagttgcaggtactagt
caagggattactgcattacaaatggatattaaaatatcaggaatagattttaaaataatc
caaatagctttagagcaagcacgactcggtcgtttgcatatactggagcaaatgaataaa
gtgatcagtaaaccaaatagcgaactaagtaaaaatgccccttcttctactactgtaaaa
atagacaaagataaaattaaagatattataggaccaggcggtaaaataataaaggaaatt
tgtgaaactagcaatgctaaaatagatataagcgatgacggaacagtttctatttatgct
tcagatagggataagataaaaattgcattagataaaattaaagcgattgctgttgagcct
gaaatcggtgaaatatttaacggtacggtaatgaaagttttagattctggtgcttttatt
aattatttaggtaataaagacggctttgtgcatattagtgaaatttcagacgcaagaata
gataaggttagcagtgttttaaaacaaggtgatatagtaaaagttaagctaataggcttt
gataataaaggtaaagcaaaactaactattaaaaatgcttacaaagatcactcttcaaat
aatacaaagcaaaaaaataatgttaaagacgattcagaatctgagcaacgacgtgatact
agtaaaaaacgtacttggaatgaagataataatactgaaatgtctgaagtaattacagaa
cgtaaatattttacatag
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