Rickettsia prowazekii Chernikova: M9W_02595
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Entry
M9W_02595 CDS
T01789
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rpw
Rickettsia prowazekii Chernikova
Pathway
rpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M9W_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpw03400
]
M9W_02595
Enzymes [BR:
rpw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M9W_02595
DNA repair and recombination proteins [BR:
rpw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M9W_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
nSTAND3
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AFE49344
LinkDB
All DBs
Position
complement(667256..669202)
Genome browser
AA seq
648 aa
AA seq
DB search
MRIAKILLPVSKLFPLDYLITEDLELNIGDLVVVHFRNKELTGIVWELDTNSEAKKIKTI
EAKAPLNLSITLEVLELIKWMSSYYMSELGSIAKLVLPINISEKPIKIKEQQVKNHFVLP
KLSEEQKQAVTILNESNKPTLIKGVTGSGKTEIYFHIIADYLIKGRQVLIMLPEIALGKQ
IINRFIDRFGFEPIIWNSSVTKAQKKMILRGILSNKVKVVIGTRSSLFLPFHNLGLIVID
EEHDDSYKQDDNILYNARDTAIVRGKFDKAKIVLCSATPSLETIYNIKTHKYQLVTLANR
YKNVDLPNIEIIDMTKEKLPKNSYLSKILIDAIKGNLENKKQALLFLNRRGYAPLMLCKA
CGHRFTCKFCSAWMVLHKATKKLECHHCGYQSKIFSSCPECLEDETLTICGPGIERIAEE
AMLLFPKSKIAVISKDHAKTPEKIAQLLHQMENLEIDILIGTQIITKGYHFPNLTLVGVI
DADLGSNNAELRASERTFQLLHQVGGRAGRGDSKGVVYLQSYYPDNIIFSYVKVGDEDRF
FTNELEIRKAANMPPFSKTASLILSGFSESKILDIARKIVQIAPKANVKILGPARSLMSK
LAGKYRYRILIIADKKFNLQKYLKFWLGFIKIPSYCQIKIDIDPKTFY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatagcaaaaatattattaccagtatcaaaattattcccattagattatttaata
actgaagatttagagctcaatatcggtgatcttgttgtcgtgcattttagaaataaggaa
ttaactggcatagtatgggaacttgatacaaattctgaggcaaaaaaaataaaaactatt
gaagcgaaagccccattgaatttaagtattactttagaagttttagaattaattaaatgg
atgagtagttactatatgtcagaacttggcagtatagccaagctcgtattacctataaat
atttctgaaaaaccgattaaaattaaagagcagcaagtcaagaatcactttgtgctacct
aaattgtcagaagaacagaaacaagcagtaacaattttaaatgaaagtaataaaccaaca
cttattaaaggtgttacaggatcaggtaaaacagaaatatatttccatataatagcagat
tatttaataaaaggtcggcaagttcttattatgttacctgaaattgcattaggcaaacaa
attattaatcgttttatagaccgatttggttttgaacctatcatatggaattcaagtgtt
accaaagctcaaaagaaaatgattttacgaggaatattaagtaataaagttaaagtagtc
attggtactagaagtagtttatttctaccttttcataatcttggattaattgtgatagat
gaagaacatgacgattcttataaacaagatgataatatattatataatgctagggatacg
gctatagtaagaggtaaatttgataaagcaaaaattgttttatgttcagcaacaccgtct
cttgaaacaatatataatataaaaacacataaatatcagttggttacgttagctaataga
tacaaaaatgttgatttgcctaatatagaaataatcgacatgactaaggaaaagttacct
aagaattcctatttatcaaagattcttatagatgctatcaaaggtaatttagaaaataaa
aagcaagcattattatttcttaatagacgtggttatgctccacttatgttatgtaaagct
tgtggtcatagatttacatgtaaattctgctctgcttggatggttttacataaagcgact
aaaaaacttgaatgtcatcattgtggttatcaaagcaaaatttttagttcttgccctgaa
tgtctagaagacgaaacattaactatatgcggtccaggaatagagcgaatagcagaagaa
gcaatgttactatttcctaagagtaaaattgcagtaataagtaaagatcatgctaaaact
ccggaaaaaatagcacagcttctacatcaaatggaaaatttagaaattgatattttaata
ggtacacaaataataacaaaaggttatcactttcctaatcttactttagttggagtaata
gatgcagatcttggaagtaataatgccgagcttagagcatctgaaagaacttttcagtta
ctacatcaagtaggtggtagagctggtaggggagatagtaaaggggtcgtatatttacaa
agctattatcctgataatataatttttagttatgttaaggttggtgatgaagatcgcttt
tttacaaatgaacttgaaataagaaaagcagcaaatatgcctccattttctaaaacggca
tctttaattttgtcaggtttcagtgagtctaaaattttagatattgccagaaagattgtc
caaattgcaccaaaagcaaacgtaaaaatcttaggaccagcgcgctcattaatgtcaaag
cttgctggtaaatatcgttatcgtatactcattatagccgataagaaatttaatttacag
aaatatttaaaattttggctaggttttatcaaaattccctcatactgtcagattaaaata
gatatcgatcctaaaactttttattag
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