Rickettsia prowazekii Chernikova: M9W_04050
Help
Entry
M9W_04050 CDS
T01789
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
rpw
Rickettsia prowazekii Chernikova
Pathway
rpw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M9W_04050 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpw03400
]
M9W_04050 (uvrA)
DNA repair and recombination proteins [BR:
rpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M9W_04050 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M9W_04050 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_25
nSTAND3
RsgA_GTPase
ATPase
AAA_21
DnaJ_CXXCXGXG
NACHT
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AFE49630
LinkDB
All DBs
Position
complement(1047116..1049977)
Genome browser
AA seq
953 aa
AA seq
DB search
MNQEYIKVRGAKEHNLKNINVDIPRNKFVVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLHLQNKPNVESISGLSPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIP
YSPVTSLPIHSQTVAEMVDIINELPKGTKVYLLAPIVRGHKGEFKREIMNLKKQGFQKLI
VNGEVCEIDDLPKLDKNKKHNIEVIVDRIVLDENLGNRLADSLESSLNLADGITYLEIVE
LPQAVKSQFEKNQRITFSEKYSCPVSGFQLTEIEPRIFSFNSPFGACPKCEGIGKEFFFD
RDLIVQDQRISIKDGAIVPWGSTSSKFILETLKALADHYKFSIEVPFISLSQSVKDILFE
GSGEEEIKFEFHDGSKTQIIKQPFAGIIPSLQEKDRTIESVLIKEELAKFKSEHKCTACS
GFRLKDEALCVKIANLHIGEVAGMSIAALQKWFIHLEEKLNQKQLFIAKRILKEINERLK
FLMNVGLDYLTLSREAGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNTRLI
ATLKRLRDLGNTVLVVEHDEETMYEADHIIDIGPGAGIHGGRVIAEGNAEKIKHFEESIT
GRYLSGRQTIKVPSETRVGHDNRAIELLGAVSNNLDNVDIKIPLGTFTAITGVSGSGKSS
LMIHTLYKAALKHLEPTSKVFPGKYRELKGLEYIDKIIDINQSPIGRTPRSNPATYTGAF
THIRDWFVELPESKARGYKVGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVKCDICNG
HRYNRETLEIKYKGKSIADILMMTVEDAMQFFDKIPLIYEKLITLNEVGLGYIKIGQSAT
TLSGGEAQRVKLAKELSRRSTGKTLYILDEPTTGLHIDDIKKLLKVLHKLVDMGNTVLVI
EHNLDVIKTADYIIDVGPEGGDKGGKIVVCGTPTDIAACKESHTGRYLKQYLI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaatatattaaggtacgcggtgctaaagagcataatctaaaaaatataaat
gttgatattccaaggaataaattcgttgttatcactggtcttagcggttcaggtaaatct
tctttagcgtttgatactatttatgcagaaggtcaaaggcgatatgtagaaagtttgtct
tcatatgctagacaattcttgcatttacaaaataaaccaaatgttgaatctatttctggg
ttatcgccagctattgcaattgatcaaaaaactacttccaaaaatcctcgttctactgtt
gggactataactgaaatttacgattatcttagattattatatgcaagagttggaattcct
tactctccggtaacaagccttccgatacatagtcaaacagttgctgagatggtagatata
attaacgaactacctaaaggtacgaaagtatatttacttgctcctattgttagaggacat
aagggcgagtttaagcgtgaaattatgaatctgaaaaagcaaggtttccagaaattaata
gttaatggggaagtttgtgaaattgatgatttaccaaaactggataaaaataagaagcat
aatatagaggttattgttgatagaatagttttagatgagaatttaggtaataggcttgca
gatagtttagagagttcattaaatcttgccgatggcattacgtatttagaaattgtggaa
ttaccacaagcagttaagagtcagtttgaaaaaaatcagcgtattactttttccgaaaaa
tattcttgtccggtatcaggttttcagcttactgaaatagaacctcgcatcttttctttt
aatagcccttttggagcatgtcctaaatgtgaaggaataggtaaagaatttttttttgac
agggatttaatagttcaggatcaaagaatttccattaaagatggtgcaatagtaccttgg
ggtagtacatcttctaaatttatcctagagacattaaaggctcttgccgatcattataaa
ttttctattgaagtaccttttatcagtttatcgcaaagtgttaaagatattttatttgaa
ggttcaggagaagaggaaataaagtttgaatttcatgatgggtctaaaacacaaataata
aaacaaccttttgctggtataataccaagtttgcaggaaaaggaccgcactatagaatct
gttttaattaaagaagaacttgctaaatttaagtcagagcataaatgtactgcttgttca
gggtttagattaaaagatgaagcattatgcgttaaaatagcaaatcttcatataggtgaa
gtagcaggtatgagtattgcagccttacaaaaatggtttattcatttagaagaaaaatta
aatcaaaagcaattatttattgctaagcgtatcctgaaagaaattaatgagagattaaaa
tttcttatgaatgtcggtcttgattatctaacattatcacgagaagcaggcactttatca
ggaggtgagagtcaacgtattcgtcttgcatctcaaataggctcaggtcttagcggtgtt
ttatatgtacttgatgagccgtctataggtcttcatcaacgagacaatacaagattaatc
gcaacactcaaaaggcttagggatctcggtaataccgttttggtagtagagcatgatgaa
gaaacaatgtatgaagcagaccacattattgatataggaccaggagctggtattcacggt
ggtcgtgttattgcagaaggaaatgctgaaaaaataaagcattttgaagaaagtattaca
ggtagatatttaagcggtcgtcaaacaattaaagtaccgtctgaaacaagggtagggcat
gataatagggcaattgaattacttggagcagtatctaataatttagataatgttgatatc
aaaattccactaggtacttttactgctataacaggagtatcaggaagtggtaaatcaagc
ttgatgattcatactttatataaggctgctttaaagcatttagagccaactagcaaagta
tttccaggtaaatatagagaattaaaaggacttgaatatattgataaaattatcgatatt
aatcaatctccgataggtagaactccgcgttcaaatcctgcaacttatacaggtgcattt
actcatattagggattggtttgtagaattacctgagtccaaagctagaggatataaagtt
ggaagattttcctttaacgttaaaggtggcagatgtgaagcgtgccaaggtgacgggcta
attaaaatagagatgcatttcttgcctgacgtatatgtaaaatgtgatatttgtaacggt
catagatataatagagaaactcttgaaataaaatataaagggaaatctattgctgatatt
ttgatgatgacagtagaagatgcaatgcaattttttgataaaattcctttgatttatgaa
aaattaattaccttaaatgaggttgggcttggctatataaaaattggtcagtctgctact
actctttcaggaggtgaggcacaacgagttaaacttgctaaagaattatcaagacgttca
actggtaaaacgctttatatacttgatgaaccaactacaggtctacatatagatgatatt
aagaaattactgaaagttttacataaacttgttgatatgggtaataccgttttagttatt
gaacataatctagatgttataaaaacagcagattatattattgatgttggtcctgaaggc
ggtgacaaaggaggtaagatagttgtatgtggtactcctacggatatagctgcctgtaag
gaaagtcatactggtagatatttaaagcaatatttgatataa
DBGET
integrated database retrieval system
