Rhodopseudomonas palustris DX-1: Rpdx1_0008
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Entry
Rpdx1_0008 CDS
T01381
Name
(GenBank) putative circadian clock protein, KaiC
KO
K08482
circadian clock protein KaiC
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
Rpdx1_0008
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DnaB_C
RecA
AAA_16
AAA_24
NACHT
AAA
AAA_22
NPHP3_N
nSTAND3
IstB_IS21
DEAD
SLFN-g3_helicase
Viral_helicase1
DUF7125
Metal_resist
Hydrolase
HIP1_clath_bdg
DUF3584
PAXNEB
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ADU41653
UniProt:
E6VE40
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Position
complement(11095..12786)
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AA seq
563 aa
AA seq
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MVDGISKALTGIEGFDDLTLGGLPTGRPSLVCGSAGCGKTLFASTFLINGARLYGEPGVF
VTFEERAVDIVDNVASLGFDLQGLIEQERILIEHIALDPTEVAEVGDYDLEALFLRLEFA
VDQIGAKRIVLDTIESLFSAFQNPAVLRAEIRRLFDWLKQKGLTAVITGERGDGSLTRQG
LEEYVSDCVILLDHRVDSQISTRRLRIVKYRGTAHGTNEYPFLIDEEGFSVLPVSSLALS
HTVHEDRISTGVADLDAMLSGGGFYRGTSVLVSGVAGSGKSSLACMMADAACRRGDRALY
LSFEESEAQTVRNMKSVGTDLGRWLSSGQLRYIAARPTFYSLEMHLAVMLREVARFKPDL
VVLDPISAFTESGQVGEVQSMLLRMVDYLKSNGITGVFTHLAHGAQTETDAGLSSLMDAW
ILLLNREAHGEFNRELYLLKARGIAHSNQVREFVMSADGIHLLPPYLGEGGALTGSARRA
EEAKARRAESERRTEVARLQAQIEQRRRRARAQIEAIQADLAADEAELNRLTQAEVSFRA
QSERDVAEMERSRGVIGSPGGTE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacggcatttccaaagcgctcacgggtatcgaaggcttcgacgacctcacctta
ggcggcttgccaacggggcgtcccagtttggtctgcggctcggccggctgcggcaagacg
ctgttcgcatcgactttcctgatcaacggcgctcggctttacggcgagccgggcgtgttc
gtcacgttcgaagagcgcgcagtcgatatcgtcgacaacgtcgcctcgctcggattcgat
ctgcagggattgatcgagcaggagcggatcctgatcgaacatatcgcgctcgatccgacc
gaagtcgcagaggtcggcgactatgatctcgaagcgctgttcctgcggttggaattcgca
gtcgatcagatcggtgccaagcggatcgtactcgacaccatcgagagtctgttctcggcg
ttccaaaatcccgcggtgctgcgggccgaaatccgccggctgttcgattggctgaaacag
aaggggctcaccgccgtcatcaccggcgagcgcggcgacggatcgctcactcggcagggc
ctcgaagaatacgtctccgactgcgtgatcctgctcgaccaccgtgtcgacagccagatc
tccacccggcggctacgaatcgtcaagtatcgtggtaccgcgcacggcaccaatgagtac
ccgttcctgatcgacgaggaaggcttcagcgtgttgccggtgtcgtcgctggcgctgtcg
cacaccgtgcacgaggaccggatctcgaccggcgtcgccgatctcgacgcgatgctgtcg
ggcggcggattctatcgcggaaccagcgtgctggtcagcggcgtcgccggctccggcaag
agttcgctggcctgcatgatggccgacgccgcctgccgtcgaggcgacagggcgctgtat
ctgtcgttcgaggaatccgaggcgcagactgtccgcaacatgaagtcggtcgggaccgat
ctcggccgatggctgagcagcggccagcttcgctacattgcggcgcggccgaccttttac
agcctcgagatgcacttggcggtgatgctgcgcgaggtcgcgcgcttcaagccggacctc
gtggtgctcgacccgatctcggccttcaccgaaagcgggcaggtcggcgaagtgcagtcg
atgctgctgcggatggtcgattatttgaagtccaacggcatcaccggcgtgttcacgcat
ctggctcatggcgcgcagaccgagaccgatgccggcctgtcgtctctgatggacgcctgg
atcctgctgctgaatcgcgaggcgcacggcgagttcaatcgcgagctttatctgctgaag
gcacgcggcatcgcccattccaatcaggtgcgggagttcgtgatgtcggctgacggcatc
cacctgctgccaccatatctcggcgagggcggcgcgctgaccggatctgcgcgccgggcc
gaggaagccaaggcgcggcgggccgagagcgagcgccgcaccgaggtggcgcgactgcag
gcccagatcgagcagcgccggcggcgcgcgcgcgcgcaaatcgaagccatccaggccgat
ctcgcggccgacgaggcagagctgaatcggctgacacaggcggaagtcagctttcgcgcg
cagagcgaacgcgatgtcgccgagatggagcggagccggggcgtcatcggctcgcccggg
ggcacggagtag
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