Rhodopseudomonas palustris DX-1: Rpdx1_0036
Help
Entry
Rpdx1_0036 CDS
T01381
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rpdx1_0036
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpx01007
]
Rpdx1_0036
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpx03016
]
Rpdx1_0036
Enzymes [BR:
rpx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Rpdx1_0036
Amino acid related enzymes [BR:
rpx01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Rpdx1_0036
Transfer RNA biogenesis [BR:
rpx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rpdx1_0036
Prokaryotic type
Rpdx1_0036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ADU41680
UniProt:
E6VF10
LinkDB
All DBs
Position
complement(41341..43752)
Genome browser
AA seq
803 aa
AA seq
DB search
MKLTLSWLKDHLDTDEPLEKLADKLTMIGLEVEGIEDKAKALAPFTIAKVLTAEKHPNAD
KLQVCTVDVGDGAAPVQVVCGAPNARAGLVTVFSPPGTYIPGKNITLGVGTIRGVESRGM
LCSAAELEISEDHDGIIELPADAPVGTAYAEWAGLGDPVLDINLTPNRQDCAGVHGIARD
LAAADMGKFKDPGIKQIPGEFPCPVNVTVEDSKLCPGFALRLVKGVKNGPSPDWLQKRLA
AIGLRPINALVDITNYLTFDRSRPLHVFDAAKVKGNLVVRRAKDGETLLALDGRTYSLDS
SVCVIADDHGVESLAGIMGGELSGCSADTTDVLIESALWNEINIAQSGRKLGINTDARYR
FERGVDPAFMLPGLELATKLVMEFCGGTPSEVVVVGNPFADDKIIDFPLAEVKRLAGIEV
PLVEVRRILTRLGFVVAGQGPVVKVAVPSWRSDVHGKADLVEEVVRIVGVEKVPLTPFER
GDAPRKPVLTQIQNRTRRAKRALAARGLTEAVTWSFISKPFAEAFGGGQPELALANPIAS
DLSDMRPSLLPGLIAAAQANADRGSPDLALFEVGQVFKGDRPQDQFMAASGVRRGVASSA
GIGRHWSGSAQATALDAKADAFAVLAAAGAPMAGLQIATGKLPAWLHPGRSGAIQIGPQN
VLGYFGELHPRVLEQLGADGPLVAFEVMLEKIPDPKQRPTRAKPALELSAFHPVSRDFAF
IVDRKVGVADIVRAAQGVDKKLITSVSVFDVYEGKGIDPDKKSVAIAVTLQPRDKTMTDQ
EIEAVAAKIVAEVTKKTGGSLRG
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccctctcctggctgaaagatcatctcgacaccgacgagccgctcgagaag
ctcgccgataagctcaccatgatcgggcttgaggttgagggcatcgaagacaaggccaag
gcgctggcgccgttcaccatcgccaaggtgctgaccgccgagaaacatcccaacgccgac
aagctgcaggtctgcaccgtcgacgtcggtgacggggctgcgccggtgcaggtggtgtgc
ggcgcgccgaatgcgcgtgccggcctcgtcaccgtgttctcgccgcccggcacctacatt
ccgggcaagaacatcacgctcggcgtcggcacgatccgcggcgtcgagagccgcggcatg
ctgtgctcggcggccgagctggaaatctccgaagaccacgacggcatcatcgagctgccg
gccgatgcgccggtcggcaccgcctatgcggaatgggccgggctcggcgatccggtgctg
gacatcaacctcacgccgaaccggcaggactgcgccggcgtgcacggcatcgcgcgcgat
ctcgccgccgccgacatgggcaagttcaaggacccgggcatcaagcagatccccggcgaa
tttccgtgcccggtcaatgtcacggtcgaggacagcaagctgtgccccggcttcgcgctg
cggctggtgaagggagtcaagaacggcccgtcgccggactggctgcagaagcgcctcgcc
gcgatcggactgcgcccgatcaacgcgctggtcgacatcaccaactacctgacattcgat
cgctcgcgcccgctgcacgtgttcgacgccgccaaggtgaagggcaatctggtggtgcgc
cgcgccaaagatggggagacgctgctggcgctcgacggccgcacctactcgctggattcg
tcggtctgcgtcatcgccgacgatcacggcgtcgagtcgctcgccggtatcatgggcggt
gagctgtcaggctgctcggccgacaccaccgatgtgctgatcgaatcggctctgtggaac
gagatcaacatcgcgcaaagcggccgcaagctcggcatcaacaccgatgcgcgctaccgc
ttcgagcgcggcgtcgatccggccttcatgctgccggggctcgaactcgccactaagctg
gtgatggagttctgtggcggcacgccgtccgaggtcgtggtggtcggcaatccgttcgcc
gacgacaagattatcgacttcccgctcgccgaggtgaagcggcttgccggcatcgaagtg
ccgctggtcgaggttcgtcgcatcctgacccgtctcggcttcgtggtcgccggccaggga
ccggtggtgaaggtcgcagtgccttcgtggcgcagcgacgttcacggcaaggcggacctc
gtcgaagaagtcgttcgcatcgtgggcgtcgaaaaggtgccgctgacgccgttcgagcgt
ggcgatgctccgcgcaagccggtgctcacccagatccagaaccgcacccgccgcgccaag
cgcgcgctggcggcccgcggcctgaccgaggcggtgacctggtcgttcatttccaagccg
ttcgccgaagcgttcggcggcggccagccggaactggctctggccaatccgatcgcatcc
gatctgtccgacatgcggccgagcctgttgcccgggctgattgctgccgcgcaggccaac
gccgatcgtggctcgcccgatctggcgctgttcgaggtcgggcaggtgttcaagggcgac
cggccgcaggaccagtttatggccgccagcggtgtccgccgcggcgtcgcctcttccgca
ggcattggccggcattggtcgggctcggcgcaggcgaccgcgctggacgccaaggccgat
gcgttcgcggtgctggctgcggccggcgcaccgatggcgggtctgcagatcgcgacgggc
aagctgccggcctggctgcatccgggccgctccggcgcgatccagatcgggccgcagaac
gtgcttggttacttcggcgaattgcatccgcgggtgctcgaacagctcggtgccgacggt
ccgctggtggcgttcgaagtgatgctggagaagatccccgatccgaagcagcggccgacc
cgcgccaagccggcgctggaattgtccgcgttccacccggtgtcgcgcgacttcgccttc
attgtcgatcgtaaggtcggggtggccgacatcgtccgtgccgcgcagggcgtcgacaag
aagctgatcacatcggtcagcgtgttcgacgtctatgagggcaagggcatcgaccccgac
aagaagtcggtggcgatcgcggtgacgctgcagccgcgcgacaagaccatgaccgatcag
gagatcgaggcggtcgcggccaagatcgtggcggaagtcaccaagaagaccggcggcagc
ctgcgcggctga
DBGET
integrated database retrieval system
