Rhodopseudomonas palustris DX-1: Rpdx1_0186
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Entry
Rpdx1_0186 CDS
T01381
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpx03016
]
Rpdx1_0186
Enzymes [BR:
rpx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rpdx1_0186
Transfer RNA biogenesis [BR:
rpx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rpdx1_0186
Prokaryotic type
Rpdx1_0186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADU41830
UniProt:
E6VH58
LinkDB
All DBs
Position
209556..210653
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AA seq
365 aa
AA seq
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MTVTTPDALLAPHDAQQDAAATPTAMPDRKPRDNNDPRNGGRGGGKQPRRDKRDVHGWVV
MDKPIGMTSTQAVAVVKRLFSAKRAGHAGTLDPLASGGLPIAMGEATKTVPFVMDGRKRY
RFTVAWGEERDTDDTEGRAVATSAERPTAEAIMALLPRFTGVIEQIPPQYSAVKIQGERA
YDLARDGEVVPLVARPVEIHELTLVEHHDTGQSVFEAECGKGTYVRALARDMGRLLGCYG
HICALRRTLVGPFDEADMIPLEELQALCDRAASGEGSLADALLPVETALDDIPALAVTRA
DAARLHRGQAVLLRGRDAPHCSGTVYVTVAGRLLALAEVGNGELIPKRVFNLTGLTASPS
LKESH
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgaccacccccgacgctttgcttgccccgcacgacgcgcagcaggacgccgcc
gccacccccaccgcgatgccggaccgcaagccgcgcgacaacaatgacccgcgcaacggc
ggccgcggcggcggcaagcagccgcgccgcgacaagcgcgacgttcacggctgggtggtg
atggacaagccgatcggcatgacctcgacccaggcggtcgcggtggtgaagcgactgttc
tcggccaaacgcgccggccacgccggcaccctcgacccgctcgcctcgggcgggctgccg
atcgcgatgggcgaagccaccaagacggttccgttcgtgatggacggccgcaagcgctac
cgcttcacggtcgcttggggcgaggaacgggataccgacgacaccgaaggccgggcagtc
gcgaccagcgccgagcggccgaccgccgaggcgatcatggccctgctgccgcgctttacc
ggggtgatcgagcagattccgccgcaatattcagccgtgaagatccagggcgaacgcgcc
tacgacttggcacgtgacggcgaggtggtgccccttgtggcccgcccggtcgagattcac
gagctgaccctggtcgagcaccatgataccgggcaatcggtgttcgaagcggagtgcggc
aaaggtacctacgtccgcgcgctcgcccgtgacatgggtcggctgctcggatgctacggc
catatctgcgccctgcggcgcaccctggtcggtccgttcgacgaggcggacatgattccg
ctggaagaattgcaggctttgtgcgatagagccgcgtccggcgagggtagcctcgccgac
gcgctgctgcccgttgagaccgcgctggacgacatcccggcactggccgtcacacgggct
gatgcggcaagactccatcggggtcaggccgttttgttgcgcggacgggatgcgcctcat
tgtagcggcacagtctatgtcacggtggcaggccggcttctggccctcgccgaagtcggc
aatggcgagctcatccccaagcgcgtgttcaacctcaccgggctgactgccagcccgagt
ctcaaagaaagtcactga
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