Rhodopseudomonas palustris DX-1: Rpdx1_0223
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Entry
Rpdx1_0223 CDS
T01381
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Rpdx1_0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_0223
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Rpdx1_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ADU41866
UniProt:
E6VH94
LinkDB
All DBs
Position
251143..252135
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AA seq
330 aa
AA seq
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MAPRANWKGFLRLSLVTCPVALYPATSDSEKISFNQINRATGHRIKYLKVDAETGDEVPA
DEIMKGYKVDTDSYIEITRDELDNIALESTRTIEIDQFVPRPEIDDLYLVRPYYLVPDGK
VGHDAYAVIRETIRSMDKVALARVVLTNREHVIALEARDKGLVGMLLRYPYEVRDAADYF
DDIQDVKITKDMLDLAKHIVEQKSGHFQPDLFEDHYESALTELINSKMAGQPVKPQARPR
GDNVVDLMDALRRSLGESGKLAPAAAPKSSAADKPAAAKPAKAKKRKTAAGQKEMLLPIS
GQGAGKAKEGPAKAKKPARSVAGSKARKAG
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcccctcgcgccaactggaagggctttctcaggttgtctctggtgacctgcccggta
gcgctctacccggccacctcggattccgagaagatcagcttcaaccagatcaaccgcgcc
accgggcatcggatcaaatacctgaaggtcgatgccgagaccggcgacgaggtgccggcc
gacgaaatcatgaagggctacaaggtcgataccgacagctacatcgaaatcaccagggac
gagctcgacaacatcgcgctggaatccacccgcaccatcgaaatcgatcagttcgtgccg
cgacccgagatcgacgatctgtatctggtccgcccgtattacctggtaccggacggcaag
gtcggtcacgatgcctatgcggtgatccgcgagaccatccgcagcatggacaaggtggcg
ctggcgcgggtggtgctgaccaatcgcgagcacgtcatcgccctggaggcgcgcgacaaa
ggcctggtcgggatgctgctgcgctatccctacgaggtgcgcgacgccgccgactatttc
gacgacatccaggacgtcaagatcaccaaggacatgctcgatctcgccaagcacatcgtc
gagcagaagtccggccacttccagccggatctgttcgaagaccactacgaaagcgcgctg
accgaactgatcaacagcaagatggccggccagccggtcaagccgcaggcccggccgcgc
ggcgacaatgtcgtcgacttgatggatgcgctgcgccggagcctcggcgaaagcggcaag
ttggcgccggctgctgcgcccaagagctctgctgcagacaagcccgccgccgcgaagcct
gcgaaagccaagaagcgcaagacggccgccggccaaaaggaaatgctgctgccgatctcc
ggccagggtgccggcaaggcgaaggaaggaccggcaaaggcaaagaagccggcgcggagc
gtggccggtagtaaggcccggaaggccggttag
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