KEGG   Rhodopseudomonas palustris DX-1: Rpdx1_0223
Entry
Rpdx1_0223        CDS       T01381                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
rpx  Rhodopseudomonas palustris DX-1
Pathway
rpx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Rpdx1_0223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpx03400]
    Rpdx1_0223
DNA repair and recombination proteins [BR:rpx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Rpdx1_0223
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ADU41866
UniProt: E6VH94
LinkDB
Position
251143..252135
AA seq 330 aa
MAPRANWKGFLRLSLVTCPVALYPATSDSEKISFNQINRATGHRIKYLKVDAETGDEVPA
DEIMKGYKVDTDSYIEITRDELDNIALESTRTIEIDQFVPRPEIDDLYLVRPYYLVPDGK
VGHDAYAVIRETIRSMDKVALARVVLTNREHVIALEARDKGLVGMLLRYPYEVRDAADYF
DDIQDVKITKDMLDLAKHIVEQKSGHFQPDLFEDHYESALTELINSKMAGQPVKPQARPR
GDNVVDLMDALRRSLGESGKLAPAAAPKSSAADKPAAAKPAKAKKRKTAAGQKEMLLPIS
GQGAGKAKEGPAKAKKPARSVAGSKARKAG
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcccctcgcgccaactggaagggctttctcaggttgtctctggtgacctgcccggta
gcgctctacccggccacctcggattccgagaagatcagcttcaaccagatcaaccgcgcc
accgggcatcggatcaaatacctgaaggtcgatgccgagaccggcgacgaggtgccggcc
gacgaaatcatgaagggctacaaggtcgataccgacagctacatcgaaatcaccagggac
gagctcgacaacatcgcgctggaatccacccgcaccatcgaaatcgatcagttcgtgccg
cgacccgagatcgacgatctgtatctggtccgcccgtattacctggtaccggacggcaag
gtcggtcacgatgcctatgcggtgatccgcgagaccatccgcagcatggacaaggtggcg
ctggcgcgggtggtgctgaccaatcgcgagcacgtcatcgccctggaggcgcgcgacaaa
ggcctggtcgggatgctgctgcgctatccctacgaggtgcgcgacgccgccgactatttc
gacgacatccaggacgtcaagatcaccaaggacatgctcgatctcgccaagcacatcgtc
gagcagaagtccggccacttccagccggatctgttcgaagaccactacgaaagcgcgctg
accgaactgatcaacagcaagatggccggccagccggtcaagccgcaggcccggccgcgc
ggcgacaatgtcgtcgacttgatggatgcgctgcgccggagcctcggcgaaagcggcaag
ttggcgccggctgctgcgcccaagagctctgctgcagacaagcccgccgccgcgaagcct
gcgaaagccaagaagcgcaagacggccgccggccaaaaggaaatgctgctgccgatctcc
ggccagggtgccggcaaggcgaaggaaggaccggcaaaggcaaagaagccggcgcggagc
gtggccggtagtaaggcccggaaggccggttag

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