Rhodopseudomonas palustris DX-1: Rpdx1_0276
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Entry
Rpdx1_0276 CDS
T01381
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rpx
Rhodopseudomonas palustris DX-1
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_0276
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Rpdx1_0276
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
RAP
HTH_39
Motif
Other DBs
NCBI-ProteinID:
ADU41918
UniProt:
E6VI22
LinkDB
All DBs
Position
complement(310053..310469)
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AA seq
138 aa
AA seq
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MTSPGFERPTDPARSALMRRVRQIGTKAEDEVAAILRQSGLRFRRNVKSLPGSPDFANKT
NQWAIFVHGCFWHRHEGCRRTTTPTRNRDFWLAKFAANVNRDKIKARLLRAMGFKVLTIW
ECETRNPSNVRRRLQRLR
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcccggctttgaaaggcccacggacccggcccgctccgcattgatgcggcgc
gtccgtcagataggtacgaaggccgaagacgaggtggcggcgatcctccgtcaatccggt
ttgcgttttcgccgcaacgtcaaatctttgccggggtcgcccgatttcgccaacaagacc
aaccaatgggcgatattcgtccatggatgcttctggcatcgtcacgaggggtgtcgtcgc
accacgacgccgacccggaatcgggatttctggctcgccaagttcgcagctaatgtgaac
cgagacaaaatcaaagcgcgattgctacgcgcgatggggttcaaggttttgacgatctgg
gagtgcgagacacgcaatccctccaatgtgcgccgccggctgcaaaggttgcgatag
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