Rhodopseudomonas palustris DX-1: Rpdx1_0325
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Entry
Rpdx1_0325 CDS
T01381
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03030
DNA replication
rpx03430
Mismatch repair
rpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpdx1_0325
03430 Mismatch repair
Rpdx1_0325
03440 Homologous recombination
Rpdx1_0325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpx03032
]
Rpdx1_0325
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_0325
Enzymes [BR:
rpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rpdx1_0325
DNA replication proteins [BR:
rpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rpdx1_0325
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rpdx1_0325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADU41967
UniProt:
E6VI71
LinkDB
All DBs
Position
complement(357646..358344)
Genome browser
AA seq
232 aa
AA seq
DB search
MREIVLDTETTGLDPLRGDRLVEIGCVEIFNRMPTGRTYHRYLNPERDMPAEAFAVHGLS
AEFLADKPLFAQVADEFLEFIGDDPLVIHNASFDIGFINAELSRLSRAPVPRDRLVDTLL
LARRKHPGVSNRLDDLCSRYAIDNSRRTKHGALLDAELLAEVYIDLIGARQSQLILADVP
AEVVGAASENRRRQRPAPLPNRLTDADLEAHRAFIATMGEKAIWPDYLAAGA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtcctcgataccgaaaccaccggcctcgacccgctgcgcggtgaccgg
ctggtcgaaatcggctgcgtcgagatcttcaaccggatgccgaccggccgcacctatcat
cgctacctcaatcccgaacgcgacatgcctgccgaggcctttgcggtgcatggactgtcg
gccgagttcctcgccgacaagccgctgttcgcccaggtcgccgatgagttcctcgaattc
atcggtgatgacccgctggtgatccacaacgcctcgttcgacatcggcttcatcaatgcc
gaactgtcacggctgtcgcgtgcgccggtgccgcgcgaccggctggtcgacacgctgctg
ctcgcccgccgcaagcatccgggcgtgtcgaaccggctcgacgatctgtgctcgcgttac
gcgatcgacaattcgcgccggaccaagcacggcgcattgctcgacgccgagctattggcc
gaggtctatatcgacctgatcggtgcccggcagtcgcagctcattttggccgatgtgccg
gccgaggtggtcggagctgccagcgagaaccgtcgccgccagcgacccgcgccgctgccg
aaccggctgaccgacgccgacctcgaagcccaccgcgccttcatcgccaccatgggcgag
aaggcgatctggccggactatctggccgctggcgcctga
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