Rhodopseudomonas palustris DX-1: Rpdx1_0419
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Entry
Rpdx1_0419 CDS
T01381
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00020
Citrate cycle (TCA cycle)
rpx00190
Oxidative phosphorylation
rpx00650
Butanoate metabolism
rpx00720
Other carbon fixation pathways
rpx01100
Metabolic pathways
rpx01110
Biosynthesis of secondary metabolites
rpx01120
Microbial metabolism in diverse environments
rpx01200
Carbon metabolism
Module
rpx_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpx_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpx_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rpdx1_0419
00650 Butanoate metabolism
Rpdx1_0419
09102 Energy metabolism
00190 Oxidative phosphorylation
Rpdx1_0419
00720 Other carbon fixation pathways
Rpdx1_0419
Enzymes [BR:
rpx01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Rpdx1_0419
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
ADU42060
UniProt:
E6VJR0
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All DBs
Position
453869..455692
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AA seq
607 aa
AA seq
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MAVSGNGAAAAGGTAYPIEDHTYDVVVVGAGGAGLRAVVGCSEAGLRTACITKVFPTRSH
TVAAQGGISASLGNMHKDDWRWHMYDTVKGSDWLGDQDSIEYMVRNAPEAVYELEHWGVP
FSRTEDGKIYQRPFGGMTMEFGKGQAQRTCAAADRTGHAMLHTMYGQALRHSAEFYIEFF
AIDLIMDDQGCCRGVVALKLDDGTIHRFKAQTTILATGGYGRAYASCTSAHTCTGDGGAM
ALRAGLPLQDMEFVQFHPTGIYGSGCLVTEGARGEGGYLVNSEGERFMERYAPSAKDLAS
RDVVSRAMTIEMREGRGVGKKKDHIFLHLDHLAPEVLHERLPGISESARIFAGVDVTREP
IPILPTVHYNMGGIPTNFHGEVVTKKDGDDNAVVPGLMAIGEAACVSVHGANRLGSNSLI
DLVVFGRAAALRCAEKLVPNGKQPELPADSAEMSLGRLDKYRYAKGGTPTAKLRERMQHV
MQNNCAVFRTGEVLAEGKELIANVYGSVGDVGVSDRSLVWNSDLVETLEFDNLIVQAVVT
MNSAANRTESRGAHAREDFPDRDDAAWMKHTLAWIGDKGDVTIDYRPVHDYTMTNDVQYI
PPKPRVY
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgagcggcaacggcgctgcggcggcgggcggtaccgcctatccgatcgaggac
cacacctacgacgtcgtggtggttggcgccggcggcgctggcctgcgcgcggtggtcggc
tgcagcgaggcgggactgcgcaccgcctgcatcaccaaggtgttcccgacccggtcgcac
accgtggcggcgcaaggcggcatctcggcctcgctcggcaacatgcacaaggacgactgg
cgctggcacatgtacgacaccgtcaaggggtcggactggctcggcgaccaggactccatc
gaatacatggtccgcaacgcgccggaagccgtgtacgagctcgagcattggggcgtgccg
ttctcgcgcaccgaggacggcaagatctatcagcggccgttcggcggcatgacgatggaa
ttcggcaagggccaggcgcagcgcacctgcgcggctgccgaccgcaccggccacgccatg
ctgcacacgatgtacggccaggcgctgcggcattcggcggagttctacatcgagttcttc
gccatcgacctgatcatggacgatcagggctgctgccgcggcgtcgtggcgctgaagctc
gacgacggcaccatccaccgcttcaaggcgcagaccacgattctcgccaccggcggctac
ggccgcgcctacgcctcctgcacctcggcgcacacctgcaccggcgacggcggtgcgatg
gcgctgcgcgccggcctgccgctgcaggacatggagttcgtccagttccacccgaccggc
atctacggctcgggctgtctggtgaccgaaggcgcccgcggtgagggcggctatctggtc
aattccgagggcgagcgcttcatggagcgctatgcgccgtccgccaaggatctcgcctcg
cgcgacgtggtttcgcgggcgatgaccatcgaaatgcgcgaaggtcgcggcgtcggcaag
aagaaggaccacatcttcctgcacctcgaccatctggcgccggaagtgctgcacgaacga
ctgccgggcatctcggaatcggcacggatcttcgccggcgtcgacgtcacccgcgagccg
atcccgatcctgccgaccgtgcactacaacatgggcggcatcccgaccaacttccacggc
gaggtcgtcaccaagaaggatggcgacgacaacgcggtggtgccgggcctgatggcgatc
ggcgaagccgcctgcgtgtcggtgcacggcgccaaccgcctcggctccaactcgctgatc
gacctcgtggtgttcggccgcgccgcggcgctgcgctgcgccgagaagctggtgccgaac
ggcaagcagccggagctgcccgcggactcggccgagatgtcgctggggcgcctcgacaag
tatcgctacgccaagggcggcactccgactgccaagctgcgcgagcggatgcagcacgtg
atgcagaacaactgcgcggtgttccgcaccggcgaagtgctcgccgagggcaaggagctg
atcgccaacgtctacggcagcgtcggcgacgtcggcgtgtcggatcgctcgctggtgtgg
aattcggatctggtcgagaccctggaattcgacaatctgatcgtccaggcggtggtgacg
atgaactcggccgccaaccgcaccgagagccgcggcgctcacgcccgcgaggacttcccg
gaccgcgacgacgccgcctggatgaagcacacgctggcctggatcggtgacaagggcgac
gtgacgatcgattaccggccggtgcacgactacacgatgacaaacgacgtccagtacatc
ccgccgaagccgcgggtgtattga
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