Rhodopseudomonas palustris DX-1: Rpdx1_0658
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Entry
Rpdx1_0658 CDS
T01381
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx00550
Peptidoglycan biosynthesis
rpx01100
Metabolic pathways
rpx01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpdx1_0658
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rpdx1_0658
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rpx01003
]
Rpdx1_0658
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Rpdx1_0658
Enzymes [BR:
rpx01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Rpdx1_0658
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rpdx1_0658
Glycosyltransferases [BR:
rpx01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Rpdx1_0658
Peptidoglycan biosynthesis and degradation proteins [BR:
rpx01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Rpdx1_0658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Toprim_3
RimK
Motif
Other DBs
NCBI-ProteinID:
ADU42296
UniProt:
E6VMB3
LinkDB
All DBs
Position
complement(701323..703572)
Genome browser
AA seq
749 aa
AA seq
DB search
MAWGRKTAGERREPTFGPGESLTDMRLTPQDRVNLADDKPKKKSAGKPGGGARSKRKPRK
GMIASVRRAIGRVVYWSAVAGIWAVLAVVGVMVWVGAHLPPIQSLEIPKRPPTITIVADD
GSTMAVRGEQAGTNVALKDLPPYLPKAFIAIEDRRFYSHFGVDPLGIGRAAVANVLHRGV
AQGGSTLTQQLAKNLFLTQDRTLTRKLQEVELALWLERKHSKAEILELYLNRVYFGSGAY
GVEAAAQKYFGKSAKEVTLVEAAMLAGLVKSPSRLAPNRNPEGAEKRAQIVLAAMAEAGF
VTAKQAQAAIANPVYTVKPTGAGTINYVADWIGEVLDDLVGQIDQSIIVETSIDPRLQSV
AEAAIIDELAAKSVKYKVTQGALVAMTPDGTVRAMIGGRNYADSQFNRAVTAKRQPGSAF
KPFVYLTAVEAGMTPETIRQDAPLDLKGWKPENYSHEYFGAVTLTQALAMSLNTVAVRLG
LEVGPKNVVRTAHRLGIASKLDANPSIALGTSEVTLTELVGAYAAFANGGLLASPHVVKR
IRTAQGNKLLYARSNETASRVMDPRAAAMMNAMMQETLRSGTAQKADLPGWIAAGKTGTS
QDFRDAWFLGYTGTLVTGVWLGNDDNSPTRKATGGGLPVEVWTRFMREALKGTTPQPLPG
GWSGGPLVTSGATGAASGSGIGGAIGGFLSGAAPTGGTIAQPGPRGEAQVTNMPPPPGAG
RMPPPTRANVRPEADAGLDGWLMDRLFGR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggggcaggaaaacagccggcgaaaggcgagagccgacattcggccccggtgaa
tcgctcaccgacatgcgcctgacgccgcaggatcgggtgaatttggccgacgacaagccg
aagaagaagtccgccggcaagcccggcggcggggcgcggagcaagcgcaagccgcgcaag
ggcatgatcgcgtcggtgcgccgggcgatcggccgcgtggtgtattggagcgcggtcgcc
ggcatctgggcggtgctggcggtggtcggcgtcatggtctgggtcggtgcgcatctgccg
ccgatccaatcgctggagatcccgaaacggccgccgaccatcaccatcgtggccgacgac
ggctcgaccatggcggtgcgcggcgagcaggccggcaccaatgtggcgctgaaggatctg
ccgccgtatctgccgaaagcgttcatcgcgatcgaggaccgacgattctattcgcatttc
ggagtcgatccgctcggcatcggccgcgcggcggtcgccaacgtgctgcaccggggcgtg
gctcagggcggctcgaccttgacgcagcagctcgccaagaacctgtttctgacccaggac
cgcaccctgacccgcaagctgcaggaggtcgaactggcgctgtggctggagcgcaagcac
tccaaggccgagatcctcgaactgtatctcaaccgggtgtatttcggctccggtgcctac
ggggtcgaggccgcagcgcagaagtatttcggcaaatcggcaaaggaggtcaccctggtc
gaggccgcgatgctggccggtctggtcaaatcgccgtcgcggctggcgccgaaccgcaat
ccggaaggcgccgagaagcgggctcagatcgtgctggcggcgatggcggaagccggcttc
gtcaccgccaagcaggcccaggccgcgatcgcaaatccggtctacaccgtcaaaccgacc
ggcgccggcaccatcaactacgtggccgactggatcggcgaagtgctcgacgatctggtc
gggcagatcgaccagtcgatcatcgtcgaaacctcgatcgatccgaggctccagtcggtc
gccgaggcagccatcatcgacgagctggcggccaagagcgtcaagtacaaagtgacgcaa
ggcgcgctggtggcgatgacgccggacggcacggtgcgggcgatgatcggcgggcggaac
tacgcggacagccagttcaaccgcgcggtgaccgccaagcggcagccgggatctgcgttc
aagccgttcgtctatctgacagcggtcgaggccgggatgacgccggagacgattcgacag
gacgccccgctcgacctcaagggctggaagccggagaactactcccacgaatatttcggc
gcggtgacgctgacacaggcgctggcgatgtcgctgaacaccgtggcggtgcggctcgga
ctcgaggtcgggccgaagaacgtggtgcggaccgcgcaccggctcggcatcgcctccaag
ctcgacgcgaacccgtcgatcgcgctcggcacttcggaggtgacgctcaccgagctggtc
ggcgcctacgccgcattcgccaatggcgggttgctggcgtcgccccatgtggtgaagcgg
atccgcaccgcgcaaggcaacaagttgctgtacgcccgcagcaacgagaccgccagccgc
gtgatggatccgcgggcggcggcgatgatgaatgcgatgatgcaggagacgctgcgctcc
ggcaccgcgcagaaggccgatctgcccggctggatcgccgccggcaagaccggcaccagc
caggatttccgcgacgcctggttcctcggctacaccgggacgctggtcaccggggtctgg
ctcgggaatgacgacaattcgccgaccaggaaggcgaccggcggcggattgccggtcgaa
gtgtggacgcggttcatgcgcgaagcgctgaaaggcaccaccccgcagccgctccccggc
ggctggagcggcggcccgctggtgacgagcggcgccaccggcgccgcatcgggctccggc
atcggcggtgcgatcggcggcttcctcagcggcgcggcgccgacaggcggcactatcgcc
caacccggcccgcgcggcgaagctcaggtcaccaacatgcctccaccaccaggcgcgggt
cgcatgccgcccccgacgcgcgccaatgtacggccagaagcggacgcgggactggatggc
tggctgatggaccggctgttcggacggtaa
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