Rhodopseudomonas palustris DX-1: Rpdx1_0696
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Entry
Rpdx1_0696 CDS
T01381
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpx
Rhodopseudomonas palustris DX-1
Pathway
rpx03030
DNA replication
rpx03430
Mismatch repair
rpx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpdx1_0696
03430 Mismatch repair
Rpdx1_0696
03440 Homologous recombination
Rpdx1_0696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpx03032
]
Rpdx1_0696
03400 DNA repair and recombination proteins [BR:
rpx03400
]
Rpdx1_0696
Enzymes [BR:
rpx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rpdx1_0696
DNA replication proteins [BR:
rpx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rpdx1_0696
DNA repair and recombination proteins [BR:
rpx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rpdx1_0696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_16
RuvB_N
AAA_5
AAA_18
AAA_14
RCF1-5-like_lid
AAA_24
AAA_19
TsaE
Rad17
AAA_2
AAA_assoc_2
SRP54
nSTAND3
SKI
AAA_28
TraI_hel_assoc_N
RNA_helicase
CbiA
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ADU42333
UniProt:
E6VMF0
LinkDB
All DBs
Position
744680..746554
Genome browser
AA seq
624 aa
AA seq
DB search
MSDTGLSATPPAAPEQPASASTPGGAYRVLARKYRPNSFDDLIGQEAVVRTVSNAFDTGR
IPQAWILTGVRGVGKTTTARILARALNYELPDGSVKGPTIHMPVHGVHCKAIMESRHMDV
LEMDAASHTGVDDVRQINDSVRYAPASARYKVYIIDEVHMLSTAAFNAFLKTLEEPPEHA
KFVFATTEIRKVPVTVLSRCQRFDLRRVEADVLMNHLSNIAQKEGVEVEPEALGIIARAA
EGSVRDSLSLFDQAIAHAAGLVRADAVRQMLGLADRTRVIELFDALARGDIAAAFAEFRD
QYDTGADPVVVLSDLAEFVNFVTRVKIVPAIADNVAFGETERLRGREFAAKLSMRVLSRM
WQMLLKGVAEVQGATRPAAAAEMVLVRIAYAADLPTPDEALRMLQQNGGGDAPAVIGSGA
SSGRGGTSAAMSSAASLSGPGAPAMSRSAPSMSAATAPTMLRGGLDGAARSPVSAPAPEP
EPPALKITTFPQLVALASEKRDVMTRLALEADVRLVRIEDGRLELALEPTASRSLINELG
RKLEQWTGRRWTVIVSNAPGQPTLRQQSEAQQNERERAAENDPRVQEVLARFPGAKLTVR
RLASEPVEIESDMHDPSERIDEDD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactggcctttctgcgacgccgcccgccgctcccgagcagccggccagcgcg
agcacaccgggcggtgcctatcgggtgctggcgcggaaatatcgccccaacagcttcgac
gatctgatcggtcaggaagcggtggtccgcaccgtctccaatgcgttcgacacgggacgg
attccgcaggcctggatcctcaccggcgtccgcggggtcggcaagaccaccacggcgcgc
atcctggcgcgggcgctgaactacgaattgccggacggctcggtgaaggggccgaccatc
cacatgccggtgcacggcgtgcactgcaaggcgatcatggaaagccggcacatggacgtg
ctggagatggacgccgcctcgcacaccggcgtcgacgatgtccgccagatcaacgacagc
gtgcgctatgcgccggcgagcgcgcgctacaaagtctacattatcgacgaagtccacatg
ctgtcgacggcggcgttcaacgccttcctgaagacgctggaggagccgccggagcacgcc
aaattcgtgttcgccaccaccgagattcggaaagtgccggtgacggtgttgtcgcgctgc
cagcgcttcgacctgcgccgggtcgaagccgacgtgctgatgaaccatctgtcgaacatc
gcccagaaggaaggcgtcgaggtcgagccggaagcgctcggcatcatcgcccgtgcggcc
gaaggttcggtgcgcgattcactgtcgctgttcgatcaggcgatcgcgcatgcggccggc
ctggtgcgcgccgacgccgttcgtcagatgctcgggctggccgaccgcacccgggtgatc
gaactgttcgacgcgctggcgcgcggggacatcgctgccgcgttcgccgaattccgcgac
cagtacgacaccggcgctgacccggtggtggtgctttccgatctcgccgaattcgtcaat
ttcgtcacccgcgtgaagatcgtgccggcgattgccgacaacgtcgcgttcggcgagacc
gaacggctgcgcggccgcgagttcgccgccaagctgtcgatgcgggtgctgtcgcggatg
tggcagatgctgctgaagggtgtcgccgaggtgcagggcgcgacccgcccggccgccgcc
gccgagatggtgctggtgcggatcgcctatgcggccgatctgccgaccccggacgaagcg
ctgcggatgctgcagcagaacggtggtggtgacgccccggccgtgatcggcagcggcgcc
agcagtggtcgcggcggcacctccgccgcaatgtcgtcggccgcatccttgtccggaccc
ggcgcgcctgcgatgtcgcgcagcgcgccgtcgatgagcgcagccactgcgccgaccatg
ctgcgcggtggtctcgatggcgccgcccgctcgccggtcagtgcgccggccccggagccc
gaaccgccggcgctgaagatcaccacgtttccgcaactcgtcgcgctggcttcggaaaag
cgcgacgtgatgacacggctggcgctcgaagccgacgtccggctggtgcgaatcgaggac
gggcggctcgaactggcgctggagcccaccgcctcgcgcagcctgatcaacgaactcggg
cgcaagctcgagcaatggaccggccggcgctggacggtgatcgtctccaacgcgcccggc
cagccgacgctgcgccagcagagcgaggcgcagcagaacgagcgtgagcgggcggcggag
aacgatccgcgggtgcaggaagtcctggcgcggtttcccggcgccaaactgacggtgcgg
cggctcgcctccgagccggtggagatcgagtctgatatgcacgatccctccgagcgaatc
gacgaagacgactag
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